RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA980587", tax_kingdom = "Shotokuvirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 1 ✖

bioproject 1

  • PRJNA980587 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23908356 23908356 PRJNA980587_P_NODE_5919_length_1185_cov_3.241906_g5420_i0 PRJNA980587 5919 1185 3.241906 38.4165861 Cressdnaviricota sp. 2748378 Viruses Viruses 60.2 7.22e-4   NTclustered gi|2896101281|gb|PQ792497.1| 2748378 g5420 i0 100 0.0978902953586498 32 0 3 0 671 702 1512 1543 MAG: Cressdnaviricota sp. isolate Ssoil065_cress3 genomic sequence blastn 116 60.2 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;