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contig_metadata

12 rows where bioproject = "PRJNA980587" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 12 ✖

bioproject 1

  • PRJNA980587 · 12 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2231651 2231651 PRJNA980587_P_NODE_89742_length_244_cov_0.900585_g88949_i0 PRJNA980587 89742 244 0.900585 2.1974274 Methanobacteriota archaeon 2026739 Archaea Archaea 105 1.7599999999999998e-24   NR MBT3970744.1 2026739 g88949 i0 61.9 4.05737704918033 84 28 98.4 2 5 244 347 430 MBT3970744.1 ArsB/NhaD family transporter [Methanobacteriota archaeon] diamond 990 105 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
8922480 8922480 PRJNA980587_P_NODE_72267_length_264_cov_2.308901_g71474_i0 PRJNA980587 72267 264 2.308901 6.09549864 root 1 Root_unresolved Root_unresolved 154 1.29e-44   NR WP_048149962.1 230356 g71474 i0 78.2 16.75 87 19 98.9 0 3 263 2 88 WP_048149962.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Methanolacinia paynteri] diamond 4422 154 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanolacinia Methanolacinia paynteri
26962738 26962738 PRJNA980587_P_NODE_57102_length_302_cov_1.641921_g56309_i0 PRJNA980587 57102 302 1.641921 4.95860142 Methanoculleus sp. 90427 Archaea Archaea 43.1 0.0482   NR MDD3856476.1 90427 g56309 i0 34.4 0.923841059602649 93 52 83.4 2 284 33 132 224 MDD3856476.1 NAD+ synthase [Methanoculleus sp.] diamond 279 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
27221714 27221714 PRJNA980587_P_NODE_88502_length_245_cov_0.895349_g87709_i0 PRJNA980587 88502 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 123 3.29e-34   NR WP_091936805.1 487685 g87709 i0 63 19.8367346938776 81 30 99.2 0 3 245 4 84 WP_091936805.1 nuclear transport factor 2 family protein [Methanolobus profundi] diamond 4860 124 0.991935483870968 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus profundi
28327068 28327068 PRJNA980587_P_NODE_55646_length_306_cov_2.896996_g54853_i0 PRJNA980587 55646 306 2.896996 8.86480776 root 1 Root_unresolved Root_unresolved 61.2 2.42e-8   NR MCI4367243.1 1906666 g54853 i0 76.3 12.2352941176471 38 9 37.3 0 306 193 357 394 MCI4367243.1 hydroxymethylglutaryl-CoA reductase, degradative [Thermoplasmata archaeon] diamond 3744 61.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29652984 29652984 PRJNA980587_P_NODE_66350_length_278_cov_1.200000_g65557_i0 PRJNA980587 66350 278 1.2 3.336 Methanobacteriati 3366610 Archaea Archaea 62 8.76e-9   NR MEJ6531470.1 2026739 g65557 i0 49.3 4.46762589928058 69 29 74.5 2 72 278 4 66 MEJ6531470.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Methanobacteriota archaeon] diamond 1242 62 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29842769 29842769 PRJNA980587_P_NODE_74291_length_260_cov_1.235294_g73498_i0 PRJNA980587 74291 260 1.235294 3.2117644 root 1 Root_unresolved Root_unresolved 92.8 9.16e-20   NR OWP57015.1 1961136 g73498 i0 49.4 8.82692307692308 85 43 98.1 0 259 5 323 407 OWP57015.1 MAG: hypothetical protein B2I17_02260 [Thermoplasmatales archaeon B_DKE] diamond 2295 93.6 0.991452991452991 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon B_DKE
30311089 30311089 PRJNA980587_P_NODE_7992_length_1000_cov_2.912621_g7390_i0 PRJNA980587 7992 1000 2.912621 29.12621 Methanosphaera sp. 2666342 Archaea Archaea 224 5.5599999999999996e-67   NR MEE3325635.1 2666342 g7390 i0 41.4 2.673 292 152 83.7 5 55 891 3 288 MEE3325635.1 C13 family peptidase [Methanosphaera sp.] diamond 2673 224 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
30374194 30374194 PRJNA980587_P_NODE_93172_length_242_cov_0.911243_g92379_i0 PRJNA980587 93172 242 0.911243 2.20520806 Methanoculleus chikugoensis 118126 Archaea Archaea 58.5 9.67e-8   NR WP_221056591.1 118126 g92379 i0 41.8 0.830578512396694 67 39 83.1 0 14 214 225 291 WP_221056591.1 sugar porter family MFS transporter [Methanoculleus chikugoensis] diamond 201 58.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus chikugoensis
32460756 32460756 PRJNA980587_P_NODE_17519_length_619_cov_2.551282_g16741_i0 PRJNA980587 17519 619 2.551282 15.79243558 Methanobrevibacter sp. 66852 Archaea Archaea 53.9 1.37e-4   NR MBO7517911.1 66852 g16741 i0 29.6 1.19224555735057 115 70 55.3 3 4 345 407 511 MBO7517911.1 hypothetical protein [Methanobrevibacter sp.] diamond 738 53.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32587289 32587289 PRJNA980587_P_NODE_96319_length_231_cov_2.012658_g95526_i0 PRJNA980587 96319 231 2.012658 4.64923998 Methanocellales archaeon 2666334 Archaea Archaea 68.6 2.53e-11   NR HIH36893.1 2666334 g95526 i0 43.8 0.948051948051948 73 41 94.8 0 3 221 707 779 HIH36893.1 alanine--tRNA ligase [Methanocellales archaeon] diamond 219 68.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales     Methanocellales archaeon
32618547 32618547 PRJNA980587_P_NODE_86520_length_246_cov_0.890173_g85727_i0 PRJNA980587 86520 246 0.890173 2.18982558 Haladaptatus caseinilyticus 2993314 Archaea Archaea 50.8 5.24e-5   NR WP_266077698.1 2993314 g85727 i0 32.4 0.902439024390244 74 49 90.2 1 244 23 145 217 WP_266077698.1 DUF4397 domain-containing protein [Haladaptatus caseinilyticus] diamond 222 50.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus caseinilyticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;