RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980587", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA980587 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30342688 30342688 PRJNA980587_P_NODE_52772_length_316_cov_1.123457_g51979_i0 PRJNA980587 52772 316 1.123457 3.55012412 Pithovirus sibericum 1450746 Viruses Viruses 75.5 2.95e-13   NR YP_009000988.1 1450746 g51979 i0 45.9 1.35759493670886 74 39 69.3 1 2 220 1498 1571 YP_009000988.1 serine-threonine kinase [Pithovirus sibericum] diamond 429 75.5 1 Viruses Pithoviruses           Alphapithovirus Alphapithovirus sibericum
31764552 31764552 PRJNA980587_P_NODE_24837_length_497_cov_3.351415_g24046_i0 PRJNA980587 24837 497 3.351415 16.65653255 Pithovirus LCPAC3 2506593 Viruses Viruses 72.4 1.13e-12   NR QBK91478.1 2506593 g24046 i0 31.8 1.55734406438632 154 94 91.8 4 481 26 2 146 QBK91478.1 MAG: hypothetical protein LCPAC302_00980 [Pithovirus LCPAC302] diamond 774 72.4 1 Viruses Pithoviruses             Pithovirus LCPAC302

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;