RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA980587", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA980587 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26779180 26779180 PRJNA980587_P_NODE_47341_length_335_cov_1.557252_g46548_i0 PRJNA980587 47341 335 1.557252 5.2167942 Bacteria 2 Bacteria Bacteria 69.7 2.81e-11   NR MCB9221735.1 2053306 g46548 i0 58.8 0.922388059701493 51 21 45.7 0 3 155 295 345 MCB9221735.1 amidohydrolase [Ignavibacteria bacterium] diamond 309 69.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28226120 28226120 PRJNA980587_P_NODE_79766_length_250_cov_1.559322_g78973_i0 PRJNA980587 79766 250 1.559322 3.898305 Ignavibacteria bacterium 2053306 Bacteria Bacteria 60.8 1.68e-8   NR MBK9249796.1 2053306 g78973 i0 42.4 0.792 66 38 79.2 0 243 46 341 406 MBK9249796.1 hypothetical protein [Ignavibacteria bacterium] diamond 198 60.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32017645 32017645 PRJNA980587_P_NODE_88438_length_245_cov_0.895349_g87645_i0 PRJNA980587 88438 245 0.895349 2.19360505 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 55.5 1.22e-6   NR PID57463.1 2026749 g87645 i0 34.6 0.991836734693878 81 49 99.2 2 1 243 210 286 PID57463.1 MAG: hypothetical protein CR986_08975 [Ignavibacteriota bacterium] diamond 243 55.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;