RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980587", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA980587 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31707383 31707383 PRJNA980587_P_NODE_88057_length_245_cov_0.895349_g87264_i0 PRJNA980587 88057 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 97.8 1.59e-21   NR MEX0721988.1 2053516 g87264 i0 55.8 6.55102040816327 77 34 94.3 0 14 244 318 394 MEX0721988.1 M3 family metallopeptidase [Balneolaceae bacterium] diamond 1605 98.6 0.991886409736308 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
31985896 31985896 PRJNA980587_P_NODE_90918_length_243_cov_1.417647_g90125_i0 PRJNA980587 90918 243 1.417647 3.44488221 Balneolales bacterium ANBcel1 3037650 Bacteria Bacteria 52.4 1.46e-5   NR MDG5767876.1 3037650 g90125 i0 40.2 1.01234567901235 82 37 98.8 3 242 3 340 411 MDG5767876.1 alpha-amylase family glycosyl hydrolase [Balneolales bacterium ANBcel1] diamond 246 52.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium ANBcel1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;