RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA980587", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA980587 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25182371 25182371 PRJNA980587_P_NODE_84780_length_247_cov_0.885057_g83987_i0 PRJNA980587 84780 247 0.885057 2.18609079 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 156 9.279999999999999e-47   NR MBX9724270.1 2364082 g83987 i0 90.2 0.995951417004049 82 8 99.6 0 247 2 37 118 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 246 156 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
26614472 26614472 PRJNA980587_P_NODE_88921_length_245_cov_0.895349_g88128_i0 PRJNA980587 88921 245 0.895349 2.19360505 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 144 2.73e-41   NR MBX9721335.1 2364082 g88128 i0 84 0.991836734693878 81 13 99.2 0 245 3 85 165 MBX9721335.1 F0F1 ATP synthase subunit alpha [Candidatus Obscuribacterales bacterium] diamond 243 144 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30437243 30437243 PRJNA980587_P_NODE_61273_length_290_cov_1.373272_g60480_i0 PRJNA980587 61273 290 1.373272 3.9824888 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 174 3.87e-48   NR MBX9671577.1 2364082 g60480 i0 91.7 1.98620689655172 96 7 99.3 1 3 290 653 747 MBX9671577.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 576 174 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;