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contig_metadata

15 rows where bioproject = "PRJNA980587", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 15 ✖

tax_clade 1

  • Bacteria candidate phyla · 15 ✖

bioproject 1

  • PRJNA980587 · 15 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3506701 3506701 PRJNA980587_P_NODE_81703_length_249_cov_0.875000_g80910_i0 PRJNA980587 81703 249 0.875 2.17875 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 144 1.52e-41   NR HDJ22686.1 2052149 g80910 i0 74.7 6 83 21 100 0 249 1 6 88 HDJ22686.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Aminicenantes bacterium] diamond 1494 144 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
11159764 11159764 PRJNA980587_P_NODE_93209_length_242_cov_0.911243_g92416_i0 PRJNA980587 93209 242 0.911243 2.20520806 Patescibacteria group bacterium 2052139 Bacteria Bacteria 120 5.17e-31   NR MFC1598622.1 2052139 g92416 i0 70.9 6.9297520661157 79 23 97.9 0 240 4 73 151 MFC1598622.1 ribose-phosphate pyrophosphokinase-like domain-containing protein [Patescibacteria group bacterium] diamond 1677 120 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26715355 26715355 PRJNA980587_P_NODE_39741_length_370_cov_2.020202_g38948_i0 PRJNA980587 39741 370 2.020202 7.4747474 Bacteria 2 Bacteria Bacteria 52 6.99e-5   NR OGL39352.1 1817876 g38948 i0 35.8 2.53783783783784 120 68 94.9 5 353 3 3 116 OGL39352.1 MAG: hypothetical protein A2042_04910, partial [Candidatus Schekmanbacteria bacterium GWA2_38_11] diamond 939 52.4 0.99236641221374 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium GWA2_38_11
28321057 28321057 PRJNA980587_P_NODE_79546_length_250_cov_2.559322_g78753_i0 PRJNA980587 79546 250 2.559322 6.398305 Candidatus Peregrinibacteria bacterium GW2 2030811 Bacteria Bacteria 60.5 2.28e-8   NR KKP37541.1 1619065 g78753 i0 43.4 0.912 76 38 87.6 2 31 249 241 314 KKP37541.1 MAG: leucyl aminopeptidase, leucyl aminopeptidase [Candidatus Peregrinibacteria bacterium GW2011_GWF2_33_10] diamond 228 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium GW2011_GWF2_33_10
29615320 29615320 PRJNA980587_P_NODE_29290_length_447_cov_3.058824_g28497_i0 PRJNA980587 29290 447 3.058824 13.67294328 Patescibacteria group bacterium 2052139 Bacteria Bacteria 55.1 1.73e-5   NR MBU0625772.1 2052139 g28497 i0 55.3 0.912751677852349 47 20 31.5 1 159 299 403 448 MBU0625772.1 DUF4215 domain-containing protein [Patescibacteria group bacterium] diamond 408 55.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29741686 29741686 PRJNA980587_P_NODE_58530_length_298_cov_1.142222_g57737_i0 PRJNA980587 58530 298 1.142222 3.40382156 Candidatus Terrybacteria bacterium RIFCSPHIGHO2_ 2750081 Bacteria Bacteria 68.9 4.36e-11   NR OHA48673.1 1802363 g57737 i0 48.3 0.895973154362416 89 37 89.6 3 268 2 419 498 OHA48673.1 MAG: glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit A [Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_58_15] diamond 267 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Terryibacteriota         Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_58_15
30057674 30057674 PRJNA980587_P_NODE_71391_length_266_cov_2.388601_g70598_i0 PRJNA980587 71391 266 2.388601 6.35367866 Patescibacteria group bacterium 2052139 Bacteria Bacteria 51.6 3.74e-5   NR MCL4375092.1 2052139 g70598 i0 32.1 1.77067669172932 84 56 93.6 1 8 256 326 409 MCL4375092.1 hypothetical protein [Patescibacteria group bacterium] diamond 471 51.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30215633 30215633 PRJNA980587_P_NODE_24252_length_505_cov_1.425926_g23461_i0 PRJNA980587 24252 505 1.425926 7.2009263 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 92 4.01e-19   NR RTL06913.1 2030827 g23461 i0 44.7 0.611881188118812 103 57 61.2 0 315 7 27 129 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 309 92 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
30980380 30980380 PRJNA980587_P_NODE_80314_length_250_cov_0.870056_g79521_i0 PRJNA980587 80314 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 88.6 1.59e-19   NR KKW04846.1 1619071 g79521 i0 75.5 6.552 53 13 63.6 0 1 159 155 207 KKW04846.1 MAG: tRNA (guanine-N(7)-)-methyltransferase [Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9] diamond 1638 88.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9
31043690 31043690 PRJNA980587_P_NODE_18315_length_603_cov_1.860377_g17534_i0 PRJNA980587 18315 603 1.860377 11.21807331 Bacteria 2 Bacteria Bacteria 66.2 8.63e-9   NR HQF41170.1 2053589 g17534 i0 28.8 1.8955223880597 208 101 94.5 8 576 7 316 494 HQF41170.1 Ig-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 1143 66.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31043700 31043700 PRJNA980587_P_NODE_92175_length_243_cov_0.905882_g91382_i0 PRJNA980587 92175 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 104 1.3e-25   NR MEK7144983.1 2052139 g91382 i0 67.1 2.79012345679012 70 23 86.4 0 211 2 125 194 MEK7144983.1 HNH endonuclease [Patescibacteria group bacterium] diamond 678 104 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31480187 31480187 PRJNA980587_P_NODE_47196_length_336_cov_1.091255_g46403_i0 PRJNA980587 47196 336 1.091255 3.6666168 Patescibacteria group bacterium 2052139 Bacteria Bacteria 47 5.88e-4   NR MCL4419714.1 2052139 g46403 i0 60.5 0.339285714285714 38 15 33.9 0 177 64 28 65 MCL4419714.1 hypothetical protein [Patescibacteria group bacterium] diamond 114 47 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31922706 31922706 PRJNA980587_P_NODE_53337_length_314_cov_1.253112_g52544_i0 PRJNA980587 53337 314 1.253112 3.93477168 Patescibacteria group bacterium 2052139 Bacteria Bacteria 77.8 2.03e-15   NR MCL4418492.1 2052139 g52544 i0 69.1 0.525477707006369 55 17 52.5 0 2 166 93 147 MCL4418492.1 alpha-hydroxy-acid oxidizing protein [Patescibacteria group bacterium] diamond 165 77.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32334360 32334360 PRJNA980587_P_NODE_79179_length_251_cov_0.865169_g78386_i0 PRJNA980587 79179 251 0.865169 2.17157419 Candidatus Colwellbacteria bacterium 2750074 Bacteria Bacteria 66.2 2.4e-11   NR MDD4931421.1 2750074 g78386 i0 70.2 1.63745019920319 47 14 56.2 0 142 2 32 78 MDD4931421.1 hypothetical protein [Candidatus Colwellbacteria bacterium] diamond 411 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Colwelliibacteriota         Candidatus Colwellbacteria bacterium
32397497 32397497 PRJNA980587_P_NODE_84079_length_248_cov_0.880000_g83286_i0 PRJNA980587 84079 248 0.88 2.1824 Patescibacteria group bacterium 2052139 Bacteria Bacteria 50.8 3.06e-6   NR MCL4419717.1 2052139 g83286 i0 87.5 0.387096774193548 32 4 38.7 0 240 145 4 35 MCL4419717.1 hypothetical protein [Patescibacteria group bacterium] diamond 96 50.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;