RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980585" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980585 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27437260 27437260 PRJNA980585_P_NODE_30883_length_277_cov_1.509804_g30629_i0 PRJNA980585 30883 277 1.509804 4.18215708 Plasmopara viticola lesion associated Partitivirus 1 2691998 Viruses Viruses 64.7 1.02e-9   NR QHD64800.1 2691999 g30629 i0 46.1 2.46931407942238 76 40 81.2 1 47 271 175 250 QHD64800.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated Partitivirus 10] diamond 684 64.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Plasmopara viticola lesion associated Partitivirus 10
32239363 32239363 PRJNA980585_P_NODE_13678_length_373_cov_1.360000_g13424_i0 PRJNA980585 13678 373 1.36 5.0728 Durnavirales sp. 2809355 Viruses Viruses 100 4.87e-22   NR WRQ64726.1 2809355 g13424 i0 48.1 0.85254691689008 106 54 84.5 1 337 23 374 479 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 318 100 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;