RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJNA980585" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA980585 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2229772 2229772 PRJNA980585_P_NODE_13042_length_380_cov_1.247557_g12788_i0 PRJNA980585 13042 380 1.247557 4.7407166 root 1 Root_unresolved Root_unresolved 157 1.63e-41   NR KAF4718682.1 32597 g12788 i0 70.4 16.6815789473684 125 31 98.7 1 3 377 183 301 KAF4718682.1 hypothetical protein FOZ63_025302, partial [Perkinsus olseni] diamond 6339 157 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
7332407 7332407 PRJNA980585_P_NODE_26366_length_290_cov_1.064516_g26112_i0 PRJNA980585 26366 290 1.064516 3.0870964 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 76.6 2.32e-14   NR TEB19254.1 2494336 g26112 i0 41.9 0.962068965517241 93 50 96.2 2 281 3 152 240 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 279 76.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
13708875 13708875 PRJNA980585_P_NODE_731_length_1257_cov_4.896959_g597_i0 PRJNA980585 731 1257 4.896959 61.55477463 Perkinsida 27998 SAR_Eukaryotes SAR_Eukaryotes 355 9.78e-116   NR KAF4666497.1 32597 g597 i0 45 8.5727923627685 409 213 96.9 3 37 1254 19 418 KAF4666497.1 beta' subunit [Perkinsus olseni] diamond 10776 358 0.991620111731844 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
14983096 14983096 PRJNA980585_P_NODE_6152_length_517_cov_3.979730_g5898_i0 PRJNA980585 6152 517 3.97973 20.5752041 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 309 2.72e-79   NTclustered gi|294889472|ref|XM_002772784.1| 423536 g5898 i0 81.088 16.9090909090909 386 73 75 0 132 517 523 138 Perkinsus marinus ATCC 50983 translation elongation factor EF-1, subunit alpha,, putative, mRNA blastn 8742 309 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
16571916 16571916 PRJNA980585_P_NODE_43673_length_250_cov_0.870056_g43419_i0 PRJNA980585 43673 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 115 1e-27   NR KAF4687761.1 32597 g43419 i0 67.1 16.728 82 27 98.4 0 248 3 602 683 KAF4687761.1 hypothetical protein FOZ60_003516 [Perkinsus olseni] diamond 4182 116 0.991379310344828 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
17533058 17533058 PRJNA980585_P_NODE_55174_length_244_cov_0.900585_g54920_i0 PRJNA980585 55174 244 0.900585 2.1974274 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 90.1 1.74e-19   NR KAF4685574.1 32597 g54920 i0 79.5 1.08196721311475 44 9 54.1 0 132 1 115 158 KAF4685574.1 hypothetical protein FOZ62_006760, partial [Perkinsus olseni] diamond 264 90.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
20081347 20081347 PRJNA980585_P_NODE_36356_length_262_cov_1.375661_g36102_i0 PRJNA980585 36356 262 1.375661 3.60423182 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 97.1 1.09e-15   NTclustered gi|294867228|ref|XM_002764969.1| 423536 g36102 i0 88.608 1.90076335877863 79 9 30 0 9 87 841 919 Perkinsus marinus ATCC 50983 Vacuolar protein sorting-associated protein, putative, mRNA blastn 498 97.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
20395676 20395676 PRJNA980585_P_NODE_17456_length_340_cov_1.153558_g17202_i0 PRJNA980585 17456 340 1.153558 3.9220972 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 152 4.37e-44   NR XP_002778466.1 423536 g17202 i0 64 2.92058823529412 111 36 94.4 1 328 8 1 111 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 993 152 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
22631476 22631476 PRJNA980585_P_NODE_1278_length_1008_cov_1.905882_g1100_i0 PRJNA980585 1278 1008 1.905882 19.21129056 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 174 1.6399999999999998e-48   NR TEB19254.1 2494336 g1100 i0 42.4 0.785714285714286 264 140 75.9 5 51 815 3 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 792 174 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
27247392 27247392 PRJNA980585_P_NODE_23483_length_303_cov_2.652174_g23229_i0 PRJNA980585 23483 303 2.652174 8.03608722 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 52 3.19e-5   NR KAF4656929.1 32597 g23229 i0 37.7 2.04950495049505 69 40 66.3 2 102 302 139 206 KAF4656929.1 hypothetical protein FOZ61_006606, partial [Perkinsus olseni] diamond 621 52 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27374155 27374155 PRJNA980585_P_NODE_24343_length_299_cov_1.362832_g24089_i0 PRJNA980585 24343 299 1.362832 4.07486768 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 136 6.17e-39   NR KAF4711062.1 32597 g24089 i0 63.2 5.70903010033445 95 35 95.3 0 13 297 1 95 KAF4711062.1 hypothetical protein FOZ62_026209, partial [Perkinsus olseni] diamond 1707 136 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27569379 27569379 PRJNA980585_P_NODE_8624_length_449_cov_1.353723_g8370_i0 PRJNA980585 8624 449 1.353723 6.07821627 root 1 Root_unresolved Root_unresolved 55.1 2.79e-6   NR KAF4704019.1 32597 g8370 i0 31.6 7.30289532293987 133 79 86.2 5 62 448 10 134 KAF4704019.1 hypothetical protein FOZ62_020843, partial [Perkinsus olseni] diamond 3279 55.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28674606 28674606 PRJNA980585_P_NODE_54467_length_244_cov_0.900585_g54213_i0 PRJNA980585 54467 244 0.900585 2.1974274 Perkinsida 27998 SAR_Eukaryotes SAR_Eukaryotes 135 1.21e-35   NR KAF4687968.1 32597 g54213 i0 82.7 8.96311475409836 81 14 99.6 0 1 243 77 157 KAF4687968.1 Protein transport protein Sec61 subunit alpha [Perkinsus olseni] diamond 2187 136 0.992647058823529 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
29116726 29116726 PRJNA980585_P_NODE_7788_length_468_cov_1.807595_g7534_i0 PRJNA980585 7788 468 1.807595 8.4595446 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 2.8699999999999997e-30   NR KAF4666497.1 32597 g7534 i0 46.5 3.19871794871795 142 67 91 1 42 467 7 139 KAF4666497.1 beta' subunit [Perkinsus olseni] diamond 1497 125 0.992 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
29331419 29331419 PRJNA980585_P_NODE_14569_length_364_cov_0.783505_g14315_i0 PRJNA980585 14569 364 0.783505 2.8519582 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 192 3.84e-58   NR XP_002774056.1 423536 g14315 i0 75.8 0.989010989010989 120 29 98.9 0 361 2 153 272 XP_002774056.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 360 192 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
29431993 29431993 PRJNA980585_P_NODE_14369_length_366_cov_0.911263_g14115_i0 PRJNA980585 14369 366 0.911263 3.33522258 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 108 9.35e-25   NR KAF4655223.1 32597 g14115 i0 44 19.3606557377049 116 65 95.1 0 7 354 472 587 KAF4655223.1 hypothetical protein FOZ61_007693 [Perkinsus olseni] diamond 7086 109 0.990825688073395 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31321657 31321657 PRJNA980585_P_NODE_38575_length_256_cov_1.267760_g38321_i0 PRJNA980585 38575 256 1.26776 3.2454656 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 119 1.18e-29   NR XP_002768583.1 423536 g38321 i0 63.5 2.98828125 85 31 99.6 0 255 1 164 248 XP_002768583.1 translation elongation factor EF-1, subunit alpha, putative [Perkinsus marinus ATCC 50983] diamond 765 119 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31732772 31732772 PRJNA980585_P_NODE_31817_length_274_cov_2.900498_g31563_i0 PRJNA980585 31817 274 2.900498 7.94736452 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.00117   NR XP_002771101.1 423536 g31563 i0 41.8 1.2043795620438 55 32 60.2 0 105 269 142 196 XP_002771101.1 thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983] diamond 330 47.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31833743 31833743 PRJNA980585_P_NODE_16817_length_345_cov_1.128676_g16563_i0 PRJNA980585 16817 345 1.128676 3.8939322 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 120 6.880000000000001e-29   NR KAF4732192.1 32597 g16563 i0 49.1 9.03478260869565 116 57 100 2 345 1 421 535 KAF4732192.1 oligosaccharyl transferase stt3 subunit, partial [Perkinsus olseni] diamond 3117 121 0.991735537190083 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31928779 31928779 PRJNA980585_P_NODE_27497_length_286_cov_2.084507_g27243_i0 PRJNA980585 27497 286 2.084507 5.96169002 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 101 1.17e-22   NR KAF4654098.1 330153 g27243 i0 68.8 13.541958041958 64 20 67.1 0 90 281 31 94 KAF4654098.1 Protein phosphatase PP2A regulatory subunit B [Perkinsus chesapeaki] diamond 3873 102 0.990196078431373 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
32302748 32302748 PRJNA980585_P_NODE_5939_length_524_cov_5.348115_g5685_i0 PRJNA980585 5939 524 5.348115 28.0241226 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 79 5.07e-15   NR XP_002784356.1 423536 g5685 i0 32 1.46564885496183 147 96 83 2 20 454 1 145 XP_002784356.1 ubiquitin, putative [Perkinsus marinus ATCC 50983] diamond 768 79 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
32712953 32712953 PRJNA980585_P_NODE_44680_length_249_cov_0.875000_g44426_i0 PRJNA980585 44680 249 0.875 2.17875 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00143   NR XP_002786591.1 423536 g44426 i0 36.7 0.951807228915663 79 44 95.2 2 1 237 55 127 XP_002786591.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 237 46.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;