RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA980585", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980585 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8922333 8922333 PRJNA980585_P_NODE_50847_length_246_cov_0.890173_g50593_i0 PRJNA980585 50847 246 0.890173 2.18982558 Nitrososphaera 497726 Archaea Archaea 52.8 0.022   NTclustered gi|647810480|gb|CP007536.1| 926571 g50593 i0 96.875 0.390243902439024 32 0 13 1 147 178 1510058 1510088 Nitrososphaera viennensis EN76, complete genome blastn 96 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera viennensis
30531648 30531648 PRJNA980585_P_NODE_50933_length_246_cov_0.890173_g50679_i0 PRJNA980585 50933 246 0.890173 2.18982558 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 42.4 0.05   NR MDW8083632.1 2972665 g50679 i0 44.3 0.74390243902439 61 33 73.2 1 189 10 9 69 MDW8083632.1 heme o synthase [Candidatus Caldarchaeum sp.] diamond 183 42.4 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
30594781 30594781 PRJNA980585_P_NODE_56853_length_243_cov_0.905882_g56599_i0 PRJNA980585 56853 243 0.905882 2.20129326 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 68.9 1.61e-11   NR MDX1373100.1 2169593 g56599 i0 46.7 0.740740740740741 60 32 74.1 0 234 55 132 191 MDX1373100.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 180 68.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;