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contig_metadata

14 rows where bioproject = "PRJNA980585" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980585 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1269318 1269318 PRJNA980585_P_NODE_24761_length_297_cov_1.375000_g24507_i0 PRJNA980585 24761 297 1.375 4.08375 Methanothrix sp. 90426 Archaea Archaea 72.8 1.87e-12   NR TFH48914.1 90426 g24507 i0 42.1 10.8686868686869 95 48 92.9 2 280 5 7 97 TFH48914.1 MAG: carboxylesterase family protein [Methanothrix sp.] diamond 3228 72.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
8608031 8608031 PRJNA980585_P_NODE_57747_length_242_cov_1.485207_g57493_i0 PRJNA980585 57747 242 1.485207 3.59420094 Haloglomus litoreum 3034026 Archaea Archaea 56.5 0.002   NTclustered gi|2463606059|gb|CP119988.1| 3034026 g57493 i0 100 1.68181818181818 30 0 12 0 147 176 2511471 2511500 Haloglomus litoreum strain DT116 chromosome, complete genome blastn 407 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus litoreum
20081736 20081736 PRJNA980585_P_NODE_60536_length_241_cov_0.916667_g60282_i0 PRJNA980585 60536 241 0.916667 2.20916747 Natronorarus salvus 3117733 Archaea Archaea 54.7 0.006   NTclustered gi|2670420129|gb|CP144125.1| 3117733 g60282 i0 100 0.120331950207469 29 0 12 0 9 37 2106491 2106463 Natronorarus salvus strain CGA53 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halalkalicoccaceae Natronorarus Natronorarus salvus
22946991 22946991 PRJNA980585_P_NODE_24738_length_297_cov_1.375000_g24484_i0 PRJNA980585 24738 297 1.375 4.08375 Haloferax 2251 Archaea Archaea 549 8.029999999999997e-152   NTclustered gi|565500445|gb|KF650666.1| 2246 g24484 i0 100 100.680134680135 297 0 100 0 1 297 574 870 Haloferax volcanii strain IARI-CFAB4 16S ribosomal RNA gene, partial sequence blastn 29902 549 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
23907123 23907123 PRJNA980585_P_NODE_24099_length_300_cov_2.035242_g23845_i0 PRJNA980585 24099 300 2.035242 6.105726 Methanobrevibacter ruminantium 83816 Archaea Archaea 56.5 0.002   NTclustered gi|288541968|gb|CP001719.1| 634498 g23845 i0 100 0.1 30 0 10 0 8 37 1575260 1575289 Methanobrevibacter ruminantium M1, complete genome blastn 30 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
26677708 26677708 PRJNA980585_P_NODE_8081_length_461_cov_1.283505_g7827_i0 PRJNA980585 8081 461 1.283505 5.91695805 Haloarculaceae archaeon 2497615 Archaea Archaea 46.2 0.0195   NR MFT4922621.1 2497615 g7827 i0 43.8 1.24945770065076 48 27 31.2 0 178 35 386 433 MFT4922621.1 aldehyde dehydrogenase (NAD+) [Haloarculaceae archaeon] diamond 576 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
26683974 26683974 PRJNA980585_P_NODE_51441_length_246_cov_0.890173_g51187_i0 PRJNA980585 51441 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 69.7 2.58e-12   NR WP_089816310.1 767519 g51187 i0 56.5 4.52439024390244 62 27 75.6 0 60 245 115 176 WP_089816310.1 class I SAM-dependent methyltransferase [Halomicrobium zhouii] diamond 1113 70.1 0.994293865905849 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium zhouii
26937222 26937222 PRJNA980585_P_NODE_10262_length_419_cov_0.890173_g10008_i0 PRJNA980585 10262 419 0.890173 3.72982487 root 1 Root_unresolved Root_unresolved 48.5 0.00209   NR WP_297523431.1 35749 g10008 i0 34.5 6.6945107398568 87 53 60.9 2 103 357 322 406 WP_297523431.1 flippase [Thermococcus sp.] diamond 2805 48.5 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.
27184053 27184053 PRJNA980585_P_NODE_37202_length_259_cov_3.274194_g36948_i0 PRJNA980585 37202 259 3.274194 8.48016246 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 55.5 8.32e-8   NR HWR98714.1 2032688 g36948 i0 77.4 1.1003861003861 31 7 35.9 0 257 165 52 82 HWR98714.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 285 55.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
30468789 30468789 PRJNA980585_P_NODE_48833_length_247_cov_0.885057_g48579_i0 PRJNA980585 48833 247 0.885057 2.18609079 Halorhabdus sp. CBA11 1961697 Archaea Archaea 65.5 3.91e-10   NR WP_154551566.1 1380432 g48579 i0 41.9 3.49797570850202 74 43 89.9 0 234 13 100 173 WP_154551566.1 PAS domain-containing protein [Halorhabdus sp. CBA1104] diamond 864 65.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorhabdus Halorhabdus sp. CBA1104
31194799 31194799 PRJNA980585_P_NODE_24215_length_300_cov_1.017621_g23961_i0 PRJNA980585 24215 300 1.017621 3.052863 Methanoregulaceae archaeon 2485498 Archaea Archaea 57 7.02e-7   NR HNJ81026.1 2485498 g23961 i0 41.7 0.6 60 33 60 1 75 254 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 180 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31385143 31385143 PRJNA980585_P_NODE_62056_length_227_cov_2.701299_g61802_i0 PRJNA980585 62056 227 2.701299 6.13194873 Methanosarcinales archaeon 2250255 Archaea Archaea 61.6 3.61e-10   NR TRZ87066.1 2250255 g61802 i0 39.7 1.77092511013216 68 41 89.9 0 24 227 3 70 TRZ87066.1 MAG: hypothetical protein D4R88_09915 [Methanosarcinales archaeon] diamond 402 61.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
32144212 32144212 PRJNA980585_P_NODE_32998_length_271_cov_1.555556_g32744_i0 PRJNA980585 32998 271 1.555556 4.21555676 Methanoregula sp. 2052170 Archaea Archaea 56.2 9.41e-7   NR MCX6682390.1 2052170 g32744 i0 51.2 0.476014760147601 43 21 47.6 0 94 222 393 435 MCX6682390.1 hypothetical protein [Methanoregula sp.] diamond 129 56.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32618511 32618511 PRJNA980585_P_NODE_33400_length_270_cov_1.538071_g33146_i0 PRJNA980585 33400 270 1.538071 4.1527917 Methanobacteriota archaeon 2026739 Archaea Archaea 63.5 6.93e-10   NR MBT4920624.1 2026739 g33146 i0 37.1 0.988888888888889 89 52 98.9 1 2 268 2 86 MBT4920624.1 hypothetical protein [Methanobacteriota archaeon] diamond 267 63.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;