RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA980585", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980585 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28384175 28384175 PRJNA980585_P_NODE_29866_length_280_cov_1.371981_g29612_i0 PRJNA980585 29866 280 1.371981 3.8415468 Fusarium oxysporum alternavirus 1 2867550 Viruses Viruses 142 4.02e-37   NR YP_010840902.1 2867550 g29612 i0 69.9 0.996428571428571 93 28 99.6 0 279 1 249 341 YP_010840902.1 hypothetical protein QK877_s2gp1 [Fusarium oxysporum alternavirus 1] diamond 279 142 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Alternaviridae Alternavirus Alternavirus foxispori
28510579 28510579 PRJNA980585_P_NODE_56907_length_243_cov_0.905882_g56653_i0 PRJNA980585 56907 243 0.905882 2.20129326 Bat rotavirus 1340801 Viruses Viruses 45.4 0.00413   NR QTE76081.1 1340801 g56653 i0 78.3 0.283950617283951 23 5 28.4 0 163 231 318 340 QTE76081.1 NSP1 protein, partial [Bat rotavirus] diamond 69 45.4 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Bat rotavirus
29684560 29684560 PRJNA980585_P_NODE_31730_length_275_cov_1.188119_g31476_i0 PRJNA980585 31730 275 1.188119 3.26732725 Victorivirus 674981 Viruses Viruses 137 1.8299999999999997e-35   NR AGO04406.1 1312445 g31476 i0 93.4 1.65818181818182 76 5 82.9 0 3 230 566 641 AGO04406.1 coat protein [Ustilaginoidea virens RNA virus 1] diamond 456 137 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Pseudototiviridae Victorivirus Victorivirus jyushi
31011714 31011714 PRJNA980585_P_NODE_28474_length_284_cov_1.099526_g28220_i0 PRJNA980585 28474 284 1.099526 3.12265384 Alternavirus 2973078 Viruses Viruses 93.6 8.42e-20   NR YP_010840905.1 2936613 g28220 i0 46.8 1.98591549295775 94 50 99.3 0 284 3 551 644 YP_010840905.1 RNA-dependent RNA polymerase [Cordyceps chanhua alternavirus 1] diamond 564 93.6 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Alternaviridae Alternavirus Alternavirus cordycipitae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;