RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980585" and tax_phylum = "Candidatus Hydrogenedentota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11158338 11158338 PRJNA980585_P_NODE_41409_length_251_cov_0.865169_g41155_i0 PRJNA980585 41409 251 0.865169 2.17157419 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 291 4.43e-74   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g41155 i0 87.698 1025.11553784861 252 27 100 4 1 251 2441359 2441607 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 257304 291 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31416622 31416622 PRJNA980585_P_NODE_45056_length_249_cov_0.875000_g44802_i0 PRJNA980585 45056 249 0.875 2.17875 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 57.4 2.79e-7   NR NLV42768.1 2030809 g44802 i0 41.7 2.40963855421687 72 42 86.7 0 223 8 897 968 NLV42768.1 HYR domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 600 57.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;