RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA980585" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6058302 6058302 PRJNA980585_P_NODE_46985_length_248_cov_0.880000_g46731_i0 PRJNA980585 46985 248 0.88 2.1824 Halalkalibaculum 2939604 Bacteria Bacteria 128 1.0099999999999999e-32   NR WP_165143567.1 2709311 g46731 i0 72.5 22.366935483871 80 22 96.8 0 244 5 262 341 WP_165143567.1 phosphoenolpyruvate carboxykinase (ATP) [Halalkalibaculum roseum] diamond 5547 129 0.992248062015504 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Halalkalibaculum Halalkalibaculum roseum
16571924 16571924 PRJNA980585_P_NODE_45333_length_249_cov_0.875000_g45079_i0 PRJNA980585 45333 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 99.8 1.0499999999999999e-23   NR WP_018128447.1 287535 g45079 i0 79.3 29.9397590361446 58 12 69.9 0 247 74 172 229 WP_018128447.1 EF-Tu/IF-2/RF-3 family GTPase, partial [Balneola vulgaris] diamond 7455 100 0.998 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola vulgaris
28605260 28605260 PRJNA980585_P_NODE_36687_length_261_cov_1.420213_g36433_i0 PRJNA980585 36687 261 1.420213 3.70675593 Balneolaceae bacterium 2053516 Bacteria Bacteria 42.7 0.0446   NR MEX0660883.1 2053516 g36433 i0 67.7 0.35632183908046 31 10 35.6 0 36 128 417 447 MEX0660883.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Balneolaceae bacterium] diamond 93 42.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
28700116 28700116 PRJNA980585_P_NODE_15547_length_355_cov_1.248227_g15293_i0 PRJNA980585 15547 355 1.248227 4.43120585 Balneolia bacterium 2094027 Bacteria Bacteria 61.6 2.7e-8   NR MCH8556164.1 2094027 g15293 i0 61 0.726760563380282 41 16 34.6 0 22 144 75 115 MCH8556164.1 UDP-glucose 4-epimerase GalE [Balneolia bacterium] diamond 258 61.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia       Balneolia bacterium
28857721 28857721 PRJNA980585_P_NODE_28048_length_285_cov_1.363208_g27794_i0 PRJNA980585 28048 285 1.363208 3.8851428 Balneolaceae bacterium 2053516 Bacteria Bacteria 91.3 4.51e-20   NR MEQ9309411.1 2053516 g27794 i0 55.7 0.736842105263158 70 31 73.7 0 212 3 131 200 MEQ9309411.1 helical backbone metal receptor [Balneolaceae bacterium] diamond 210 91.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;