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contig_metadata

7 rows where bioproject = "PRJNA980585" and tax_kingdom = "Fusobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 7 ✖

bioproject 1

  • PRJNA980585 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2230292 2230292 PRJNA980585_P_NODE_42022_length_250_cov_1.994350_g41768_i0 PRJNA980585 42022 250 1.99435 4.985875 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 462 8.83e-126   NTclustered gi|922689899|gb|CP012410.1| 712357 g41768 i0 100 176.84 250 0 100 0 1 250 51625 51874 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 44210 462 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
8922162 8922162 PRJNA980585_P_NODE_13527_length_375_cov_1.019868_g13273_i0 PRJNA980585 13527 375 1.019868 3.824505 Cetobacterium 180162 Bacteria Bacteria 643 4.629999999999999e-180   NTclustered gi|2865366169|gb|CP122292.1| 188913 g13273 i0 97.6 5 375 9 100 0 1 375 370778 371152 Cetobacterium somerae strain MSU41 chromosome, complete genome blastn 1875 643 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
14982928 14982928 PRJNA980585_P_NODE_50592_length_246_cov_0.890173_g50338_i0 PRJNA980585 50592 246 0.890173 2.18982558 Cetobacterium somerae 188913 Bacteria Bacteria 265 2.62e-66   NTclustered gi|2666488225|gb|CP143319.1| 188913 g50338 i0 86.235 16.0325203252033 247 30 99 4 1 245 2041148 2040904 Cetobacterium somerae strain ceto chromosome, complete genome blastn 3944 265 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
21356860 21356860 PRJNA980585_P_NODE_37497_length_259_cov_1.236559_g37243_i0 PRJNA980585 37497 259 1.236559 3.20268781 Cetobacterium somerae 188913 Bacteria Bacteria 438 1.5499999999999996e-118   NTclustered gi|2666488225|gb|CP143319.1| 188913 g37243 i0 97.297 360.826254826255 259 6 100 1 1 259 1318758 1318501 Cetobacterium somerae strain ceto chromosome, complete genome blastn 93454 438 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
21356922 21356922 PRJNA980585_P_NODE_40957_length_251_cov_0.865169_g40703_i0 PRJNA980585 40957 251 0.865169 2.17157419 Leptotrichiaceae bacterium 2782225 Bacteria Bacteria 73.9 4.16e-13   NR MBP7026459.1 2782225 g40703 i0 48.2 1.9840637450199201 83 41 96.8 1 243 1 64 146 MBP7026459.1 arginine--tRNA ligase [Leptotrichiaceae bacterium] diamond 498 73.9 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae   Leptotrichiaceae bacterium
22631542 22631542 PRJNA980585_P_NODE_17018_length_343_cov_1.581481_g16764_i0 PRJNA980585 17018 343 1.581481 5.42447983 Fusobacterium polymorphum 76857 Bacteria Bacteria 627 4.239999999999999e-175   NTclustered gi|2706496642|gb|CP084152.1| 76857 g16764 i0 99.708 488.545189504373 342 1 99 0 1 342 754021 754362 Fusobacterium polymorphum strain KCOM2594 chromosome, complete genome blastn 167571 627 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum
29173745 29173745 PRJNA980585_P_NODE_21689_length_313_cov_3.191667_g21435_i0 PRJNA980585 21689 313 3.191667 9.98991771 Fusobacterium sp. 68766 Bacteria Bacteria 43.9 0.0326   NR WP_101474947.1 68766 g21435 i0 38.2 0.527156549520767 55 33 52.7 1 207 43 116 169 WP_101474947.1 AAA family ATPase [Fusobacterium sp.] diamond 165 43.9 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;