contig_metadata
6 rows where bioproject = "PRJNA980585" and tax_clade = "delta/epsilon subdivisions"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6057865 | 6057865 | PRJNA980585_P_NODE_22105_length_311_cov_1.424370_g21851_i0 | PRJNA980585 | 22105 | 311 | 1.42437 | 4.4297907 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 475 | 1.4599999999999995e-129 | NTclustered | gi|451917356|gb|KC451220.1| | 34034 | g21851 | i0 | 94.212 | 85.9807073954984 | 311 | 18 | 100 | 0 | 1 | 311 | 48 | 358 | Uncultured delta proteobacterium clone RLBp2603 16S ribosomal RNA gene, partial sequence | blastn | 26740 | 475 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 13708411 | 13708411 | PRJNA980585_P_NODE_3491_length_657_cov_3.030822_g3240_i0 | PRJNA980585 | 3491 | 657 | 3.030822 | 19.91250054 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 859 | 0 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g3240 | i0 | 90.382 | 164.018264840183 | 655 | 62 | 99 | 1 | 1 | 655 | 12745 | 13398 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 107760 | 859 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 18806487 | 18806487 | PRJNA980585_P_NODE_29255_length_281_cov_6.750000_g29001_i0 | PRJNA980585 | 29255 | 281 | 6.75 | 18.9675 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 206 | 1.88e-48 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g29001 | i0 | 80.282 | 49.5124555160142 | 284 | 46 | 99 | 5 | 2 | 281 | 13884 | 13607 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 13913 | 206 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 21671704 | 21671704 | PRJNA980585_P_NODE_20357_length_321_cov_1.814516_g20103_i0 | PRJNA980585 | 20357 | 321 | 1.814516 | 5.82459636 | Lujinxingia vulgaris | 2600176 | Bacteria | Bacteria | 193 | 3.05e-58 | NR | WP_146980241.1 | 2600176 | g20103 | i0 | 83 | 44.5514018691589 | 106 | 18 | 99.1 | 0 | 2 | 319 | 244 | 349 | WP_146980241.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Lujinxingia vulgaris] | diamond | 14301 | 193 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Lujinxingiaceae | Lujinxingia | Lujinxingia vulgaris | |||
| 28011660 | 28011660 | PRJNA980585_P_NODE_43885_length_250_cov_0.870056_g43631_i0 | PRJNA980585 | 43885 | 250 | 0.870056 | 2.17514 | Bacteria | 2 | Bacteria | Bacteria | 48.9 | 2.55e-4 | NR | PKN46041.1 | 2013744 | g43631 | i0 | 38.8 | 1.68 | 80 | 47 | 94.8 | 2 | 248 | 12 | 131 | 209 | PKN46041.1 MAG: hypothetical protein CVU59_07260, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-17] | diamond | 420 | 48.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-17 | ||||||
| 29709960 | 29709960 | PRJNA980585_P_NODE_12310_length_389_cov_1.196203_g12056_i0 | PRJNA980585 | 12310 | 389 | 1.196203 | 4.65322967 | Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9 | 1797899 | Bacteria | Bacteria | 56.6 | 2.78e-6 | NR | OGR08896.1 | 1797899 | g12056 | i0 | 32.8 | 0.917737789203085 | 119 | 77 | 91.8 | 3 | 360 | 4 | 703 | 818 | OGR08896.1 MAG: hypothetical protein A2341_27610 [Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9] | diamond | 357 | 56.6 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;