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contig_metadata

15 rows where bioproject = "PRJNA980585", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 15 ✖

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA980585 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11158605 11158605 PRJNA980585_P_NODE_60329_length_241_cov_0.916667_g60075_i0 PRJNA980585 60329 241 0.916667 2.20916747 Rhabdammina cornuta 159866 SAR_Eukaryotes SAR_Eukaryotes 235 2.0099999999999997e-57   NTclustered gi|66932472|gb|AY818731.1| 159866 g60075 i0 84.979 43.0373443983403 233 33 96 2 9 240 186 417 Rhabdammina cornuta clone A4 alpha tubulin gene, partial cds blastn 10372 235 1 Eukaryota Sar   Foraminifera   Astrorhizida Astrorhizidae Rhabdammina Rhabdammina cornuta
12433603 12433603 PRJNA980585_P_NODE_14030_length_369_cov_1.560811_g13776_i0 PRJNA980585 14030 369 1.560811 5.75939259 root 1 Root_unresolved Root_unresolved 160 4.2400000000000003e-44   NR ETO14870.1 46433 g13776 i0 62 7.86991869918699 121 46 98.4 0 5 367 330 450 ETO14870.1 hypothetical protein RFI_22497 [Reticulomyxa filosa] diamond 2904 161 0.993788819875776 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
15297243 15297243 PRJNA980585_P_NODE_28372_length_284_cov_1.450237_g28118_i0 PRJNA980585 28372 284 1.450237 4.11867308 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 152 2.4699999999999998e-42   NR ETO09453.1 46433 g28118 i0 75.3 11.9049295774648 93 23 98.2 0 1 279 183 275 ETO09453.1 hypothetical protein RFI_27925 [Reticulomyxa filosa] diamond 3381 152 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
16571915 16571915 PRJNA980585_P_NODE_43073_length_250_cov_0.870056_g42819_i0 PRJNA980585 43073 250 0.870056 2.17514 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 115 7.29e-28   NR ETO18591.1 46433 g42819 i0 70.4 0.972 81 24 97.2 0 3 245 419 499 ETO18591.1 P-type ATPase [Reticulomyxa filosa] diamond 243 115 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
17532757 17532757 PRJNA980585_P_NODE_3494_length_657_cov_1.957192_g3243_i0 PRJNA980585 3494 657 1.957192 12.85875144 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 352 7.24e-117   NR ETN98485.1 46433 g3243 i0 75.8 29.2374429223744 219 53 100 0 657 1 185 403 ETN98485.1 hypothetical protein RFI_39013 [Reticulomyxa filosa] diamond 19209 352 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27120697 27120697 PRJNA980585_P_NODE_51542_length_246_cov_0.890173_g51288_i0 PRJNA980585 51542 246 0.890173 2.18982558 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 71.6 2.52e-12   NR ETO06202.1 46433 g51288 i0 45 3.70731707317073 80 43 97.6 1 245 6 505 583 ETO06202.1 hypothetical protein RFI_31194 [Reticulomyxa filosa] diamond 912 71.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28200691 28200691 PRJNA980585_P_NODE_28926_length_282_cov_2.105263_g28672_i0 PRJNA980585 28926 282 2.105263 5.93684166 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 146 2.71e-40   NR ETO12574.1 46433 g28672 i0 69.2 2.8936170212766 91 28 96.8 0 274 2 222 312 ETO12574.1 dual function enzyme: UDP-glucose 4-epimerase [Reticulomyxa filosa] diamond 816 147 0.993197278911565 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28510553 28510553 PRJNA980585_P_NODE_32987_length_271_cov_1.555556_g32733_i0 PRJNA980585 32987 271 1.555556 4.21555676 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 119 5.65e-29   NR ETO24530.1 46433 g32733 i0 62.2 3.7970479704797 90 34 99.6 0 1 270 255 344 ETO24530.1 protein kinase, cAMP-dependent, catalytic chain [Reticulomyxa filosa] diamond 1029 119 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29678418 29678418 PRJNA980585_P_NODE_23350_length_304_cov_1.549784_g23096_i0 PRJNA980585 23350 304 1.549784 4.71134336 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 110 1.43e-25   NR ETO12540.1 46433 g23096 i0 63.1 2.94078947368421 84 31 82.9 0 254 3 299 382 ETO12540.1 hypothetical protein RFI_24836 [Reticulomyxa filosa] diamond 894 110 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31131752 31131752 PRJNA980585_P_NODE_48195_length_247_cov_1.701149_g47941_i0 PRJNA980585 48195 247 1.701149 4.20183803 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00197   NR ETO31420.1 46433 g47941 i0 40.4 0.692307692307692 57 33 69.2 1 8 178 166 221 ETO31420.1 hypothetical protein RFI_05701 [Reticulomyxa filosa] diamond 171 46.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31194791 31194791 PRJNA980585_P_NODE_12835_length_382_cov_2.792880_g12581_i0 PRJNA980585 12835 382 2.79288 10.6688016 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00848   NR ETO26890.1 46433 g12581 i0 35.9 0.722513089005236 92 57 70.7 2 105 374 62 153 ETO26890.1 hypothetical protein RFI_10244, partial [Reticulomyxa filosa] diamond 276 46.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31385122 31385122 PRJNA980585_P_NODE_43756_length_250_cov_0.870056_g43502_i0 PRJNA980585 43756 250 0.870056 2.17514 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00925   NR ETO05837.1 46433 g43502 i0 52.3 0.528 44 21 52.8 0 119 250 167 210 ETO05837.1 mucin-like low complexity glycoprotein, partial [Reticulomyxa filosa] diamond 132 44.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31543247 31543247 PRJNA980585_P_NODE_8136_length_460_cov_1.193798_g7882_i0 PRJNA980585 8136 460 1.193798 5.4914708 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 119 4.94e-28   NR ETO09060.1 46433 g7882 i0 42.7 0.932608695652174 143 82 93.3 0 3 431 153 295 ETO09060.1 hypothetical protein RFI_28330 [Reticulomyxa filosa] diamond 429 119 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32049207 32049207 PRJNA980585_P_NODE_13798_length_372_cov_0.892977_g13544_i0 PRJNA980585 13798 372 0.892977 3.32187444 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 140 5.27e-36   NR ETO12540.1 46433 g13544 i0 59.6 6.26612903225806 109 44 87.9 0 371 45 434 542 ETO12540.1 hypothetical protein RFI_24836 [Reticulomyxa filosa] diamond 2331 140 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32270913 32270913 PRJNA980585_P_NODE_60558_length_241_cov_0.916667_g60304_i0 PRJNA980585 60558 241 0.916667 2.20916747 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 52.4 1.33e-5   NR ETO05938.1 46433 g60304 i0 41.7 0.896265560165975 72 38 89.6 2 24 239 230 297 ETO05938.1 trichohyalin [Reticulomyxa filosa] diamond 216 52.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;