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contig_metadata

7 rows where bioproject = "PRJNA980585", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 7 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 7 ✖

bioproject 1

  • PRJNA980585 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7332776 7332776 PRJNA980585_P_NODE_46106_length_248_cov_1.731429_g45852_i0 PRJNA980585 46106 248 1.731429 4.29394392 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 64.7 7.47e-10   NR MFA6600427.1 2035772 g45852 i0 47.4 3.88306451612903 78 36 91.9 3 3 230 1713 1787 MFA6600427.1 FG-GAP-like repeat-containing protein [Candidatus Omnitrophota bacterium] diamond 963 64.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26874395 26874395 PRJNA980585_P_NODE_39901_length_252_cov_1.469274_g39647_i0 PRJNA980585 39901 252 1.469274 3.70257048 Bacteria 2 Bacteria Bacteria 82.4 3.82e-17   NR MCA9413024.1 2035772 g39647 i0 48.6 5.55952380952381 74 38 88.1 0 252 31 29 102 MCA9413024.1 sulfatase-like hydrolase/transferase [Candidatus Omnitrophota bacterium] diamond 1401 82.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30215601 30215601 PRJNA980585_P_NODE_41872_length_251_cov_0.865169_g41618_i0 PRJNA980585 41872 251 0.865169 2.17157419 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 95.1 6.14e-21   NR MDP2911429.1 2035772 g41618 i0 48.2 6.95617529880478 83 43 99.2 0 1 249 237 319 MDP2911429.1 saccharopine dehydrogenase NADP-binding domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1746 95.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31454479 31454479 PRJNA980585_P_NODE_60376_length_241_cov_0.916667_g60122_i0 PRJNA980585 60376 241 0.916667 2.20916747 PVC group 1783257 Bacteria Bacteria 101 1.03e-23   NR MCL5098480.1 2035772 g60122 i0 63.2 5.87551867219917 76 28 94.6 0 14 241 214 289 MCL5098480.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 1416 102 0.990196078431373 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31480169 31480169 PRJNA980585_P_NODE_59376_length_242_cov_0.911243_g59122_i0 PRJNA980585 59376 242 0.911243 2.20520806 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 103 1.2999999999999998e-24   NR MBI3313852.1 2035772 g59122 i0 57.5 0.991735537190083 80 34 99.2 0 2 241 30 109 MBI3313852.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 240 103 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31543201 31543201 PRJNA980585_P_NODE_12996_length_380_cov_3.006515_g12742_i0 PRJNA980585 12996 380 3.006515 11.424757 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.1 4.02e-6   NR MBI3316561.1 2035772 g12742 i0 40.3 0.568421052631579 72 40 54.5 1 101 307 18 89 MBI3316561.1 RNA-binding protein [Candidatus Omnitrophota bacterium] diamond 216 53.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32460739 32460739 PRJNA980585_P_NODE_49539_length_247_cov_0.885057_g49285_i0 PRJNA980585 49539 247 0.885057 2.18609079 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 123 1.33e-30   NR MCU0666904.1 2035772 g49285 i0 70.4 1.96761133603239 81 24 98.4 0 3 245 135 215 MCU0666904.1 recombinase family protein [Candidatus Omnitrophota bacterium] diamond 486 123 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;