RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA980585", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 13 ✖

tax_clade 1

  • Metamonada · 13 ✖

bioproject 1

  • PRJNA980585 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12433936 12433936 PRJNA980585_P_NODE_31090_length_277_cov_1.117647_g30836_i0 PRJNA980585 31090 277 1.117647 3.09588219 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 98.2 4.149999999999999e-23   NR XP_001303658.1 412133 g30836 i0 52.1 9.82310469314079 96 42 99.6 2 277 2 5 100 XP_001303658.1 small Rab GTPase Rab11b [Trichomonas vaginalis G3] diamond 2721 98.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
12748687 12748687 PRJNA980585_P_NODE_7390_length_479_cov_1.273399_g7136_i0 PRJNA980585 7390 479 1.273399 6.09958121 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 148 1.15e-41   NR XP_001316606.1 412133 g7136 i0 44.7 1.89770354906054 152 84 95.2 0 24 479 10 161 XP_001316606.1 regulation of endocytosis [Trichomonas vaginalis G3] diamond 909 148 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
13708335 13708335 PRJNA980585_P_NODE_30751_length_277_cov_2.774510_g30497_i0 PRJNA980585 30751 277 2.77451 7.6853927 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 65.8 3.27e-6   NTclustered gi|2319615616|ref|XR_007835995.1| 412133 g30497 i0 90.385 0.84115523465704 52 2 18 3 2 52 2561 2610 Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0034210), rRNA blastn 233 65.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
26899712 26899712 PRJNA980585_P_NODE_50541_length_246_cov_0.890173_g50287_i0 PRJNA980585 50541 246 0.890173 2.18982558 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 40.8 0.0352   NR XP_068349850.1 1144522 g50287 i0 32.2 0.719512195121951 59 35 72 1 26 202 3 56 XP_068349850.1 Dynein light chain LC6, flagellar outer arm [Tritrichomonas foetus] diamond 177 40.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28321041 28321041 PRJNA980585_P_NODE_5406_length_546_cov_3.363636_g5152_i0 PRJNA980585 5406 546 3.363636 18.36545256 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 124 6.789999999999999e-31   NR XP_001324382.1 412133 g5152 i0 40.2 0.928571428571429 169 95 92.9 4 39 545 3 165 XP_001324382.1 cysteine-type peptidase protein [Trichomonas vaginalis G3] diamond 507 124 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28731596 28731596 PRJNA980585_P_NODE_34267_length_268_cov_1.184615_g34013_i0 PRJNA980585 34267 268 1.184615 3.1747682 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 73.6 7.25e-13   NR XP_067769137.1 135588 g34013 i0 47.6 1.88059701492537 84 39 91.8 2 21 266 603 683 XP_067769137.1 C2 domain containing protein [Histomonas meleagridis] diamond 504 73.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29583715 29583715 PRJNA980585_P_NODE_35710_length_264_cov_1.057592_g35456_i0 PRJNA980585 35710 264 1.057592 2.79204288 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 94.7 5.92e-22   NR XP_068358606.1 1144522 g35456 i0 51.7 2.98863636363636 87 40 98.9 1 2 262 44 128 XP_068358606.1 Thymidylate kinase [Tritrichomonas foetus] diamond 789 94.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30374127 30374127 PRJNA980585_P_NODE_22392_length_309_cov_2.262712_g22138_i0 PRJNA980585 22392 309 2.262712 6.99178008 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 46.2 0.00476   NR XP_067775289.1 135588 g22138 i0 33 1.85436893203884 88 55 84.5 2 309 49 279 363 XP_067775289.1 Protein disulfide-isomerase [Histomonas meleagridis] diamond 573 46.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30468772 30468772 PRJNA980585_P_NODE_32433_length_273_cov_1.255000_g32179_i0 PRJNA980585 32433 273 1.255 3.42615 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 73.2 1.36e-13   NR XP_001301591.1 412133 g32179 i0 46 0.956043956043956 87 44 93.4 2 8 262 77 162 XP_001301591.1 GTPase protein [Trichomonas vaginalis G3] diamond 261 73.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31005628 31005628 PRJNA980585_P_NODE_17934_length_337_cov_0.924242_g17680_i0 PRJNA980585 17934 337 0.924242 3.11469554 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 78.2 4.18e-14   NR XP_067772736.1 135588 g17680 i0 34.5 0.979228486646884 110 71 97 1 7 333 258 367 XP_067772736.1 uncharacterized protein GO595_007217 [Histomonas meleagridis] diamond 330 78.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31833761 31833761 PRJNA980585_P_NODE_59317_length_242_cov_0.911243_g59063_i0 PRJNA980585 59317 242 0.911243 2.20520806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.6 3.54e-15   NR XP_067773498.1 135588 g59063 i0 49.4 2.02066115702479 81 39 99.2 2 3 242 84 163 XP_067773498.1 ras-like GTP-binding protein RhoL isoform X2 [Histomonas meleagridis] diamond 489 76.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
32207514 32207514 PRJNA980585_P_NODE_28178_length_285_cov_1.028302_g27924_i0 PRJNA980585 28178 285 1.028302 2.9306607 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 54.7 3.91e-6   NR XP_001302885.1 412133 g27924 i0 41.8 2.50526315789474 79 45 83.2 1 13 249 3 80 XP_001302885.1 spectrin binding [Trichomonas vaginalis G3] diamond 714 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32365900 32365900 PRJNA980585_P_NODE_4739_length_578_cov_53.805941_g4485_i0 PRJNA980585 4739 578 53.805941 310.99833898 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 199 1.23e-61   NR XP_068360038.1 1144522 g4485 i0 57.2 6.37889273356401 173 74 89.8 0 28 546 5 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 3687 199 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;