RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA977246" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20395512 20395512 PRJNA977246_S_NODE_8916_length_518_cov_3733.844581_g8038_i0 PRJNA977246 8916 518 3733.844581 19341.31492958 Plasmopara viticola lesion associated mononegaambi virus 8 2692020 Viruses Viruses 116 2.49e-27   NR WKE35285.1 2692020 g8038 i0 47.2 1.44787644787645 125 65 71.8 1 105 476 17 141 WKE35285.1 hypothetical protein [Plasmopara viticola lesion associated mononegaambi virus 8] diamond 750 116 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Plasmopamonavirus Plasmopamonavirus plasmoparae
32466983 32466983 PRJNA977246_S_NODE_31499_length_218_cov_3.253968_g30507_i0 PRJNA977246 31499 218 3.253968 7.09365024 Plasmopamonavirus 2842965 Viruses Viruses 42.4 0.0381   NR YP_010798440.1 2692020 g30507 i0 42.9 1.54128440366972 56 30 75.7 2 198 34 1859 1913 YP_010798440.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated mononegaambi virus 8] diamond 336 42.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Plasmopamonavirus Plasmopamonavirus plasmoparae
32524152 32524152 PRJNA977246_S_NODE_7339_length_581_cov_4.498188_g6533_i0 PRJNA977246 7339 581 4.498188 26.13447228 Plasmopara viticola lesion associated mononegaambi virus 8 2692020 Viruses Viruses 53.9 4.79e-5   NR WKE35288.1 2692020 g6533 i0 27.5 0.769363166953528 149 105 75.9 2 570 130 59 206 WKE35288.1 hypothetical protein [Plasmopara viticola lesion associated mononegaambi virus 8] diamond 447 53.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Plasmopamonavirus Plasmopamonavirus plasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;