RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA977246", tax_phylum = "Mycoplasmatota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8604428 8604428 PRJNA977246_S_NODE_36767_length_194_cov_1.684848_g35775_i0 PRJNA977246 36767 194 1.684848 3.26860512 Spiroplasma tabanidicola 324079 Bacteria Bacteria 52.8 0.017   NTclustered gi|1780488998|gb|CP046276.1| 324079 g35775 i0 100 0.144329896907216 28 0 14 0 66 93 924760 924787 Spiroplasma tabanidicola strain TAUS-1 chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma tabanidicola
30847643 30847643 PRJNA977246_S_NODE_32674_length_212_cov_3.098361_g31682_i0 PRJNA977246 32674 212 3.098361 6.56852532 Acholeplasmataceae bacterium 1898209 Bacteria Bacteria 74.7 1.35e-13   NR NLN51024.1 1898209 g31682 i0 61.4 0.806603773584906 57 22 80.7 0 172 2 1005 1061 NLN51024.1 hypothetical protein [Acholeplasmataceae bacterium] diamond 171 74.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;