RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA977246", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
951665 951665 PRJNA977246_S_NODE_49501_length_155_cov_2.365079_g48509_i0 PRJNA977246 49501 155 2.365079 3.66587245 Coltivirus dermacentoris 3428066 Viruses Viruses 220 3.2999999999999996e-53   NTclustered gi|2758887253|gb|PP473574.1| 46839 g48509 i0 92.258 34.3225806451613 155 12 100 0 1 155 5362 5208 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 5320 220 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
30215575 30215575 PRJNA977246_S_NODE_50432_length_153_cov_1.919355_g49440_i0 PRJNA977246 50432 153 1.919355 2.93661315 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 103 3.99e-24   NR CAI9858974.1 3048756 g49440 i0 98 0.980392156862745 50 1 98 0 3 152 87 136 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 150 103 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;