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contig_metadata

6 rows where bioproject = "PRJNA977246" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA977246 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6054579 6054579 PRJNA977246_S_NODE_28665_length_234_cov_9128.087805_g27673_i0 PRJNA977246 28665 234 9128.087805 21359.7254637 Orpinomyces sp. OUS1 301046 Fungi Fungi 95.3 3.43e-15   NTclustered gi|55859492|emb|AJ864475.1| 301046 g27673 i0 79.286 78.1709401709402 140 25 59 4 47 183 4723 4585 Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 blastn 18292 95.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Orpinomyces Orpinomyces sp. OUS1
7647072 7647072 PRJNA977246_S_NODE_4526_length_769_cov_3479.164865_g3939_i0 PRJNA977246 4526 769 3479.164865 26754.77781185 Monoblepharidaceae 79273 Fungi Fungi 185 7.289999999999998e-42   NTclustered gi|82398210|gb|DQ273777.1| 109947 g3939 i0 95.69 20.4538361508453 116 4 15 1 617 732 2207 2321 Monoblepharella mexicana isolate AFTOL-ID 33 28S ribosomal RNA gene, partial sequence blastn 15729 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Monoblepharidaceae Monoblepharella Monoblepharella mexicana
12430668 12430668 PRJNA977246_S_NODE_33550_length_208_cov_2.636872_g32558_i0 PRJNA977246 33550 208 2.636872 5.48469376 Neocallimastix sp. GE13 324672 Fungi Fungi 69.4 1.81e-7   NTclustered gi|82398558|gb|DQ273822.1| 324672 g32558 i0 90.566 19.5 53 3 25 2 88 139 1868 1817 Neocallimastix sp. GE13 isolate AFTOL-ID 638 28S ribosomal RNA gene, partial sequence blastn 4056 69.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix sp. GE13
28390309 28390309 PRJNA977246_S_NODE_21566_length_293_cov_3.189394_g20574_i0 PRJNA977246 21566 293 3.189394 9.34492442 root 1 Root_unresolved Root_unresolved 52.4 4.82e-6   NR KAJ3383484.1 109889 g20574 i0 54 2.36518771331058 50 21 51.2 1 290 141 71 118 KAJ3383484.1 profilin, required for normal timing of actin polymerization in response to thermal stress [Lobulomyces angularis] diamond 693 52.8 0.992424242424242 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales Lobulomycetaceae Lobulomyces Lobulomyces angularis
29678388 29678388 PRJNA977246_S_NODE_18390_length_328_cov_591.511706_g17398_i0 PRJNA977246 18390 328 591.511706 1940.15839568 Quaeritorhiza haematococci 2654861 Fungi Fungi 79 2.01e-14   NR KAJ3088323.1 2654861 g17398 i0 36.8 1.84756097560976 106 59 93.3 2 314 9 697 798 KAJ3088323.1 nuA3 HAT complex component nto1, partial [Quaeritorhiza haematococci] diamond 606 79 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
29684550 29684550 PRJNA977246_S_NODE_42910_length_172_cov_2.538462_g41918_i0 PRJNA977246 42910 172 2.538462 4.36615464 Chytriomycetaceae 1352827 Fungi Fungi 63.2 9.02e-10   NR KAJ3253536.1 4814 g41918 i0 57.1 6.73255813953488 49 21 85.5 0 13 159 667 715 KAJ3253536.1 hypothetical protein HDU77_004502 [Chytriomyces hyalinus] diamond 1158 63.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;