RNAquarium Metadata Server
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contig_metadata

36 rows where bioproject = "PRJNA977246", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 36 ✖

tax_phylum 1

  • Chloroflexota · 36 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 36 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2226817 2226817 PRJNA977246_S_NODE_36202_length_196_cov_3.041916_g35210_i0 PRJNA977246 36202 196 3.041916 5.96215536 Anaerolineae bacterium 2052143 Bacteria Bacteria 110 1.65e-27   NR MBC7810090.1 2052143 g35210 i0 91.5 0.903061224489796 59 5 90.3 0 178 2 114 172 MBC7810090.1 ABC transporter permease [Anaerolineae bacterium] diamond 177 110 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
6054595 6054595 PRJNA977246_S_NODE_29325_length_231_cov_2.029703_g28333_i0 PRJNA977246 29325 231 2.029703 4.68861393 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 152 2.8499999999999993e-42   NR HJT64442.1 3047546 g28333 i0 94.7 3.94805194805195 76 4 98.7 0 4 231 301 376 HJT64442.1 ATP-binding protein [Candidatus Limnocylindria bacterium] diamond 912 152 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
7329535 7329535 PRJNA977246_S_NODE_6766_length_610_cov_288.061962_g5982_i0 PRJNA977246 6766 610 288.061962 1757.1779682 Chloroflexia bacterium 2448782 Bacteria Bacteria 236 1.07e-75   NR MBA2777068.1 2448782 g5982 i0 59.2 2.70491803278689 184 75 90.5 0 561 10 21 204 MBA2777068.1 FAD-dependent oxidoreductase [Chloroflexia bacterium] diamond 1650 236 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
9879507 9879507 PRJNA977246_S_NODE_34208_length_205_cov_2.289773_g33216_i0 PRJNA977246 34208 205 2.289773 4.69403465 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 185 1.69e-42   NTclustered gi|2874253698|emb|OY969424.1| 1672391 g33216 i0 83.673 1.36585365853659 196 32 96 0 1 196 431349 431154 MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 blastn 280 185 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
11472659 11472659 PRJNA977246_S_NODE_2609_length_1082_cov_8.146249_g2231_i0 PRJNA977246 2609 1082 8.146249 88.14241418 Bacillati 1783272 Bacteria Bacteria 409 5.67e-109   NTclustered gi|470481958|ref|NR_076505.1| 357808 g2231 i0 74.333 335.125693160813 1087 221 98 53 21 1082 8 1061 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 362606 412 0.992718446601942 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
12748320 12748320 PRJNA977246_S_NODE_9630_length_495_cov_3919.420601_g8718_i0 PRJNA977246 9630 495 3919.420601 19401.13197495 Anaerolineae bacterium 2052143 Bacteria Bacteria 118 1.84e-27   NR HEX9076066.1 2052143 g8718 i0 49.6 0.854545454545454 141 70 84.8 1 459 40 1 141 HEX9076066.1 hydantoinase/oxoprolinase family protein [Anaerolineae bacterium] diamond 423 118 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
13704525 13704525 PRJNA977246_S_NODE_15391_length_371_cov_2.812865_g14401_i0 PRJNA977246 15391 371 2.812865 10.43572915 Bacteria 2 Bacteria Bacteria 181 4.13e-51   NR MCX6045349.1 2026724 g14401 i0 94.3 1.42318059299191 88 5 71.2 0 349 86 405 492 MCX6045349.1 NADH dehydrogenase (quinone) subunit D [Chloroflexota bacterium] diamond 528 182 0.994505494505495 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
13704767 13704767 PRJNA977246_S_NODE_24271_length_268_cov_4.200837_g23279_i0 PRJNA977246 24271 268 4.200837 11.25824316 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 122 1.8399999999999998e-23   NTclustered gi|2893358443|emb|OZ220735.1| 3069543 g23279 i0 87.619 44.7350746268657 105 13 39 0 1 105 2878307 2878411 MAG: Phototrophicaceae bacterium isolate 252cb3c6-93c9-4785-98a9-44529c25b936 genome assembly, chromosome: 1 blastn 11989 122 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
13705062 13705062 PRJNA977246_S_NODE_36271_length_196_cov_2.215569_g35279_i0 PRJNA977246 36271 196 2.215569 4.34251524 Chloroflexota 200795 Bacteria Bacteria 69.7 6.03e-12   NR MDQ3250192.1 2026724 g35279 i0 91.4 5.52551020408163 35 3 53.6 0 90 194 1 35 MDQ3250192.1 tetratricopeptide repeat protein [Chloroflexota bacterium] diamond 1083 69.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
13705137 13705137 PRJNA977246_S_NODE_40011_length_181_cov_5.019737_g39019_i0 PRJNA977246 40011 181 5.019737 9.08572397 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 191 3.12e-44   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g39019 i0 90.345 5.56353591160221 145 14 80 0 1 145 1959140 1959284 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 1007 191 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
14022997 14022997 PRJNA977246_S_NODE_9131_length_510_cov_4079.646570_g8240_i0 PRJNA977246 9131 510 4079.64657 20806.197507 Caldilineaceae bacterium 2614250 Bacteria Bacteria 124 6.2599999999999994e-30   NR MCC6458751.1 2614250 g8240 i0 54.1 0.794117647058823 135 48 71.2 2 51 413 166 300 MCC6458751.1 SH3 domain-containing protein [Caldilineaceae bacterium] diamond 405 124 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
17528757 17528757 PRJNA977246_S_NODE_10614_length_467_cov_17.289954_g9679_i0 PRJNA977246 10614 467 17.289954 80.74408518 Bellilinea sp. 2838785 Bacteria Bacteria 71.6 7.92e-13   NR HMN13731.1 2838785 g9679 i0 39 0.642398286937901 100 58 62.3 2 3 293 11 110 HMN13731.1 hypothetical protein [Bellilinea sp.] diamond 300 71.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Bellilinea Bellilinea sp.
17529168 17529168 PRJNA977246_S_NODE_25514_length_257_cov_8047.780702_g24522_i0 PRJNA977246 25514 257 8047.780702 20682.79640414 Chloroflexia bacterium 2448782 Bacteria Bacteria 124 2.23e-33   NR MBA3275000.1 2448782 g24522 i0 80 1.98443579766537 75 15 87.5 0 227 3 111 185 MBA3275000.1 NAD(P)H-dependent oxidoreductase [Chloroflexia bacterium] diamond 510 124 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
18803350 18803350 PRJNA977246_S_NODE_45175_length_165_cov_20.036765_g44183_i0 PRJNA977246 45175 165 20.036765 33.06066225 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 279 5.81e-71   NTclustered gi|371779831|emb|HE614790.1| 166587 g44183 i0 98.125 92.9090909090909 160 3 97 0 1 160 160 1 Uncultured Chloroflexi bacterium partial 16S rRNA gene, clone H06L-1 blastn 15330 279 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
19120536 19120536 PRJNA977246_S_NODE_9975_length_486_cov_4.146608_g9052_i0 PRJNA977246 9975 486 4.146608 20.15251488 Chloroflexota bacterium 2026724 Bacteria Bacteria 241 1.42e-78   NR MCX6044995.1 2026724 g9052 i0 84.1 0.851851851851852 138 22 85.2 0 1 414 51 188 MCX6044995.1 50S ribosomal protein L6 [Chloroflexota bacterium] diamond 414 241 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
20077988 20077988 PRJNA977246_S_NODE_34796_length_202_cov_3.497110_g33804_i0 PRJNA977246 34796 202 3.49711 7.0641622 Bacteria 2 Bacteria Bacteria 127 2.92e-33   NR MBA2634114.1 2026724 g33804 i0 92.5 3.96534653465347 67 5 99.5 0 1 201 161 227 MBA2634114.1 methionine adenosyltransferase [Chloroflexota bacterium] diamond 801 127 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
20395128 20395128 PRJNA977246_S_NODE_16676_length_350_cov_775.457944_g15684_i0 PRJNA977246 16676 350 775.457944 2714.102804 Chloroflexota bacterium 2026724 Bacteria Bacteria 79.7 7.51e-15   NR MBI2864840.1 2026724 g15684 i0 54.9 0.608571428571429 71 32 60.9 0 303 91 171 241 MBI2864840.1 sodium:calcium antiporter [Chloroflexota bacterium] diamond 213 79.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
22628000 22628000 PRJNA977246_S_NODE_16578_length_352_cov_3.557276_g15587_i0 PRJNA977246 16578 352 3.557276 12.52161152 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 429 1.32e-115   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g15587 i0 88.636 6.40909090909091 352 40 100 0 1 352 1959167 1958816 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 2256 429 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
26962683 26962683 PRJNA977246_S_NODE_38162_length_188_cov_3.150943_g37170_i0 PRJNA977246 38162 188 3.150943 5.92377284 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 79.3 2.78e-16   NR CAA9290579.1 1672391 g37170 i0 75 0.829787234042553 52 13 83 0 26 181 45 96 CAA9290579.1 MAG: hypothetical protein AVDCRST_MAG93-3859, partial [uncultured Chloroflexia bacterium] diamond 156 79.3 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
27595000 27595000 PRJNA977246_S_NODE_51244_length_151_cov_2.704918_g50252_i0 PRJNA977246 51244 151 2.704918 4.08442618 Chloroflexota bacterium 2026724 Bacteria Bacteria 95.5 2.5e-21   NR MEP7290567.1 2026724 g50252 i0 85.4 2.86092715231788 48 7 95.4 0 149 6 327 374 MEP7290567.1 ABC transporter substrate-binding protein [Chloroflexota bacterium] diamond 432 95.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27658198 27658198 PRJNA977246_S_NODE_24084_length_270_cov_2.020747_g23092_i0 PRJNA977246 24084 270 2.020747 5.4560169 Chloroflexia bacterium 2448782 Bacteria Bacteria 47 4.78e-4   NR HEX8220513.1 2448782 g23092 i0 48.8 0.477777777777778 43 22 47.8 0 145 17 3 45 HEX8220513.1 hypothetical protein [Chloroflexia bacterium] diamond 129 47 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
27822223 27822223 PRJNA977246_S_NODE_40044_length_181_cov_3.703947_g39052_i0 PRJNA977246 40044 181 3.703947 6.70414407 Bacteria 2 Bacteria Bacteria 75.9 4.86e-15   NR MBL8129916.1 2448782 g39052 i0 89.1 2.28729281767956 46 5 76.2 0 138 1 1 46 MBL8129916.1 hypothetical protein [Chloroflexia bacterium] diamond 414 75.9 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
28226057 28226057 PRJNA977246_S_NODE_46966_length_161_cov_2.318182_g45974_i0 PRJNA977246 46966 161 2.318182 3.73227302 Chloroflexota bacterium 2026724 Bacteria Bacteria 96.3 1.11e-21   NR MCY7419463.1 2026724 g45974 i0 88.5 0.968944099378882 52 6 96.9 0 2 157 307 358 MCY7419463.1 SLBB domain-containing protein [Chloroflexota bacterium] diamond 156 96.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28415906 28415906 PRJNA977246_S_NODE_47766_length_159_cov_2.438462_g46774_i0 PRJNA977246 47766 159 2.438462 3.87715458 Chloroflexota bacterium 2026724 Bacteria Bacteria 106 4.1e-25   NR MCV0404560.1 2026724 g46774 i0 96.2 0.981132075471698 52 2 98.1 0 2 157 201 252 MCV0404560.1 ABC transporter substrate-binding protein [Chloroflexota bacterium] diamond 156 106 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28447521 28447521 PRJNA977246_S_NODE_16186_length_358_cov_4.243161_g15196_i0 PRJNA977246 16186 358 4.243161 15.19051638 Kallotenue papyrolyticum 1325125 Bacteria Bacteria 48.1 0.00135   NR WP_026370513.1 1325125 g15196 i0 38.9 0.603351955307263 72 35 53.6 3 165 356 64 134 WP_026370513.1 PIG-L deacetylase family protein [Kallotenue papyrolyticum] diamond 216 48.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Kallotenuales Kallotenuaceae Kallotenue Kallotenue papyrolyticum
28668489 28668489 PRJNA977246_S_NODE_19587_length_314_cov_4.715789_g18595_i0 PRJNA977246 19587 314 4.715789 14.80757746 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 62.4 5.47e-10   NR MEO7294566.1 3047546 g18595 i0 55.7 0.582802547770701 61 26 57.3 1 15 194 42 102 MEO7294566.1 hypothetical protein [Candidatus Limnocylindria bacterium] diamond 183 62.4 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
28952793 28952793 PRJNA977246_S_NODE_39248_length_184_cov_2.838710_g38256_i0 PRJNA977246 39248 184 2.83871 5.2232264 Chloroflexota bacterium 2026724 Bacteria Bacteria 98.6 6.17e-24   NR HEX2514922.1 2026724 g38256 i0 73.8 0.994565217391304 61 16 99.5 0 183 1 1 61 HEX2514922.1 hypothetical protein [Chloroflexota bacterium] diamond 183 98.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29085099 29085099 PRJNA977246_S_NODE_18148_length_331_cov_5.612583_g17156_i0 PRJNA977246 18148 331 5.612583 18.57764973 Caldilinea 233191 Bacteria Bacteria 134 9.689999999999999e-34   NR MCE7981672.1 2293554 g17156 i0 67.6 4.74924471299094 105 30 92.4 2 311 6 215 318 MCE7981672.1 hypothetical protein [Caldilinea sp. CFX5] diamond 1572 135 0.992592592592593 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea Caldilinea sp. CFX5
29804964 29804964 PRJNA977246_S_NODE_24991_length_262_cov_3.648069_g23999_i0 PRJNA977246 24991 262 3.648069 9.55794078 Chloroflexota bacterium 2026724 Bacteria Bacteria 91.7 4.8e-22   NR MDQ3541377.1 2026724 g23999 i0 87 0.618320610687023 54 7 61.8 0 259 98 28 81 MDQ3541377.1 hypothetical protein [Chloroflexota bacterium] diamond 162 91.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30184092 30184092 PRJNA977246_S_NODE_49992_length_154_cov_1.984000_g49000_i0 PRJNA977246 49992 154 1.984 3.05536 Caldilineaceae bacterium 2614250 Bacteria Bacteria 70.1 1.32e-12   NR MCC6457606.1 2614250 g49000 i0 78.4 0.720779220779221 37 8 72.1 0 112 2 70 106 MCC6457606.1 carbohydrate ABC transporter permease [Caldilineaceae bacterium] diamond 111 70.1 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30380205 30380205 PRJNA977246_S_NODE_14812_length_381_cov_5.034091_g13822_i0 PRJNA977246 14812 381 5.034091 19.17988671 Bacteria 2 Bacteria Bacteria 175 6.24e-49   NR MDQ3247840.1 2026724 g13822 i0 87.2 2.5748031496063 109 14 85.8 0 22 348 156 264 MDQ3247840.1 DNA repair protein RecN [Chloroflexota bacterium] diamond 981 175 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30380212 30380212 PRJNA977246_S_NODE_48312_length_158_cov_1.689922_g47320_i0 PRJNA977246 48312 158 1.689922 2.67007676 Bacteria 2 Bacteria Bacteria 102 2.8099999999999998e-24   NR MDQ3614742.1 2026724 g47320 i0 88.5 5.92405063291139 52 6 98.7 0 156 1 135 186 MDQ3614742.1 DUF2961 domain-containing protein [Chloroflexota bacterium] diamond 936 102 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30752875 30752875 PRJNA977246_S_NODE_30254_length_225_cov_3.545918_g29262_i0 PRJNA977246 30254 225 3.545918 7.9783155 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 111 1.78e-28   NR CAA9290579.1 1672391 g29262 i0 72.2 0.96 72 20 96 0 220 5 91 162 CAA9290579.1 MAG: hypothetical protein AVDCRST_MAG93-3859, partial [uncultured Chloroflexia bacterium] diamond 216 111 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
30784424 30784424 PRJNA977246_S_NODE_27914_length_240_cov_2.654028_g26922_i0 PRJNA977246 27914 240 2.654028 6.3696672 Caldilineaceae bacterium 2614250 Bacteria Bacteria 108 2.45e-25   NR MFN2201982.1 2614250 g26922 i0 67.5 0.9625 77 25 96.3 0 239 9 2 78 MFN2201982.1 phosphotransferase [Caldilineaceae bacterium] diamond 231 108 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
31701239 31701239 PRJNA977246_S_NODE_43477_length_170_cov_3.390071_g42485_i0 PRJNA977246 43477 170 3.390071 5.7631207 Anaerolineales bacterium 2073117 Bacteria Bacteria 41.6 0.00841   NR HSJ89399.1 2073117 g42485 i0 39.2 0.9 51 28 90 1 9 161 18 65 HSJ89399.1 DUF4160 domain-containing protein [Anaerolineales bacterium] diamond 153 41.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32365846 32365846 PRJNA977246_S_NODE_21799_length_291_cov_2.480916_g20807_i0 PRJNA977246 21799 291 2.480916 7.21946556 Chloroflexota bacterium 2026724 Bacteria Bacteria 169 1.96e-48   NR MCY7419463.1 2026724 g20807 i0 89.9 0.917525773195876 89 9 91.8 0 3 269 352 440 MCY7419463.1 SLBB domain-containing protein [Chloroflexota bacterium] diamond 267 169 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;