RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA977246" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA977246 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2226888 2226888 PRJNA977246_S_NODE_39302_length_184_cov_2.412903_g38310_i0 PRJNA977246 39302 184 2.412903 4.43974152 Lumbricus terrestris 6398 Annelida Annelida 331 1.8000000000000002e-86   NTclustered gi|742524040|gb|KM986897.1| 6398 g38310 i0 98.925 101.086956521739 186 0 100 1 1 184 391 206 Lumbricus terrestris isolate 0-1_6 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 18600 331 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Lumbricus Lumbricus terrestris
3502277 3502277 PRJNA977246_S_NODE_47003_length_161_cov_2.098485_g46011_i0 PRJNA977246 47003 161 2.098485 3.37856085 Phascolosoma scolops 210802 Annelida Annelida 89.8 1.02e-13   NTclustered gi|86372481|gb|DQ300085.1| 210802 g46011 i0 94.737 31.9627329192547 57 3 35 0 102 158 70 126 Phascolosoma scolops isolate DNA100813 histone H3 gene, partial cds blastn 5146 89.8 1 Eukaryota Opisthokonta Metazoa Annelida Sipuncula Phascolosomatiformes Phascolosomatidae Phascolosoma Phascolosoma scolops
26899653 26899653 PRJNA977246_S_NODE_35061_length_201_cov_2.941860_g34069_i0 PRJNA977246 35061 201 2.94186 5.9131386 Dimorphilus gyrociliatus 2664684 Annelida Annelida 90.1 4.97e-21   NR CAD5125634.1 2664684 g34069 i0 91.7 6.44776119402985 48 4 71.6 0 199 56 104 151 CAD5125634.1 DgyrCDS13834 [Dimorphilus gyrociliatus] diamond 1296 90.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;