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contig_metadata

14 rows where bioproject = "PRJNA977246", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 14 ✖

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJNA977246 · 14 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2226159 2226159 PRJNA977246_S_NODE_11902_length_436_cov_4752.034398_g10940_i0 PRJNA977246 11902 436 4752.034398 20718.86997528 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 383 1.3099999999999995e-101   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g10940 i0 91.489 35.5389908256881 282 19 64 4 159 436 4112 4392 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15495 383 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
6054722 6054722 PRJNA977246_S_NODE_34365_length_204_cov_3.308571_g33373_i0 PRJNA977246 34365 204 3.308571 6.74948484 uncultured Hypotrichia 305490 SAR_Eukaryotes SAR_Eukaryotes 316 5.72e-82   NTclustered gi|1859609753|gb|MT641063.1| 305490 g33373 i0 94.608 55.3235294117647 204 11 100 0 1 204 223 426 Uncultured Hypotrichia clone OTU84.7 large subunit ribosomal RNA gene, partial sequence blastn 11286 316 1 Eukaryota Sar   Ciliophora Spirotrichea       uncultured Hypotrichia
7329151 7329151 PRJNA977246_S_NODE_33166_length_209_cov_10397.600000_g32174_i0 PRJNA977246 33166 209 10397.6 21730.984 Isotricha prostoma 5987 SAR_Eukaryotes SAR_Eukaryotes 156 1.36e-33   NTclustered gi|2643596954|gb|PP067626.1| 5987 g32174 i0 91.228 54.1722488038277 114 10 55 0 1 114 3844 3731 Isotricha prostoma isolate 03.MDA03 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 11322 156 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha prostoma
7646729 7646729 PRJNA977246_S_NODE_12206_length_430_cov_28.800499_g11241_i0 PRJNA977246 12206 430 28.800499 123.8421457 Spirotrichea 33829 SAR_Eukaryotes SAR_Eukaryotes 686 0   NTclustered gi|220966760|gb|FJ545743.1| 94289 g11241 i0 95.571 85.8325581395349 429 17 99 2 3 430 5947 5520 Sterkiella histriomuscorum 17S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; macronuclear blastn 36908 691 0.992764109985528 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
8604003 8604003 PRJNA977246_S_NODE_21627_length_292_cov_6.482890_g20635_i0 PRJNA977246 21627 292 6.48289 18.9300388 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g20635 i0 96.97 0.212328767123288 33 1 11 0 260 292 41 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 62 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
9879898 9879898 PRJNA977246_S_NODE_6528_length_624_cov_15.421849_g5760_i0 PRJNA977246 6528 624 15.421849 96.23233776 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 361 9.06e-95   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g5760 i0 85.593 22.3333333333333 354 39 56 8 276 624 4046 4392 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13936 361 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
10197664 10197664 PRJNA977246_S_NODE_42468_length_173_cov_4.180556_g41476_i0 PRJNA977246 42468 173 4.180556 7.23236188 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 76.8 8.62e-10   NTclustered gi|118500778|gb|EF094960.1| 36767 g41476 i0 100 23.6011560693642 41 0 24 0 45 85 118 158 Euplotes focardii strain 95 small subunit ribosomal RNA gene, partial sequence blastn 4083 76.8 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes focardii
12431119 12431119 PRJNA977246_S_NODE_8470_length_535_cov_6.156126_g7609_i0 PRJNA977246 8470 535 6.156126 32.9352741 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.004   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g7609 i0 100 0.0560747663551402 30 0 6 0 1 30 9 38 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 30 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
12748206 12748206 PRJNA977246_S_NODE_43750_length_169_cov_7.078571_g42758_i0 PRJNA977246 43750 169 7.078571 11.96278499 Amphisiellidae 99916 SAR_Eukaryotes SAR_Eukaryotes 279 5.95e-71   NTclustered gi|751363249|gb|KP266659.1| 1071703 g42758 i0 98.726 92.6390532544379 157 2 93 0 13 169 1293 1449 Parabistichella variabilis isolate B102 28S ribosomal RNA gene, partial sequence blastn 15656 279 1 Eukaryota Sar   Ciliophora Spirotrichea     Parabistichella Parabistichella variabilis
13704984 13704984 PRJNA977246_S_NODE_32791_length_211_cov_927.445055_g31799_i0 PRJNA977246 32791 211 927.445055 1956.90906605 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g31799 i0 100 0.672985781990521 30 0 14 0 9 38 10 39 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 142 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
15296715 15296715 PRJNA977246_S_NODE_20352_length_305_cov_6.539855_g19360_i0 PRJNA977246 20352 305 6.539855 19.94655775 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 477 3.959999999999999e-130   NTclustered gi|1837628855|gb|MN158348.1| 5909 g19360 i0 95.05 75.1770491803279 303 15 99 0 1 303 2660 2962 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 22929 477 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
15296983 15296983 PRJNA977246_S_NODE_48652_length_157_cov_2.242188_g47660_i0 PRJNA977246 48652 157 2.242188 3.52023516 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 291 2.52e-74   NTclustered gi|1802599796|gb|MT001205.1| 41631 g47660 i0 100 100.859872611465 157 0 100 0 1 157 232 76 Colpoda sp. strain HFCC864 small subunit ribosomal RNA gene, partial sequence blastn 15835 291 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
22628372 22628372 PRJNA977246_S_NODE_29258_length_231_cov_3.490099_g28266_i0 PRJNA977246 29258 231 3.490099 8.06212869 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|471219142|ref|XM_004024053.1| 5932 g28266 i0 96.875 0.138528138528139 32 1 14 0 88 119 594 625 Ichthyophthirius multifiliis protein kinase domain protein (IMG5_200040) mRNA, complete cds blastn 32 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
24220601 24220601 PRJNA977246_S_NODE_35499_length_199_cov_3.000000_g34507_i0 PRJNA977246 35499 199 3 5.97 Sessilida 1974272 SAR_Eukaryotes SAR_Eukaryotes 340 3.2899999999999996e-89   NTclustered gi|1251948965|gb|KY675198.1| 2042498 g34507 i0 97.487 93.3768844221105 199 5 100 0 1 199 80 278 Epistylis sp. 1 JI2016080701 large subunit ribosomal RNA gene, partial sequence blastn 18582 340 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. 1 JI2016080701

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;