RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA977246", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA977246 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
950973 950973 PRJNA977246_S_NODE_19181_length_319_cov_2.993103_g18189_i0 PRJNA977246 19181 319 2.993103 9.54799857 Minisyncoccota bacterium 2053589 Bacteria Bacteria 311 4.47e-80   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g18189 i0 84.858 114.984326018809 317 39 97 8 3 313 443662 443975 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 36680 311 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30847636 30847636 PRJNA977246_S_NODE_24814_length_264_cov_2.544681_g23822_i0 PRJNA977246 24814 264 2.544681 6.71795784 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.7 3.36e-7   NR MEZ0208561.1 2053589 g23822 i0 29.8 0.954545454545455 84 59 95.5 0 11 262 16 99 MEZ0208561.1 GNAT family N-acetyltransferase [Candidatus Paceibacterota bacterium] diamond 252 54.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;