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contig_metadata

33 rows where bioproject = "PRJNA977246" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 33 ✖

bioproject 1

  • PRJNA977246 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
950973 950973 PRJNA977246_S_NODE_19181_length_319_cov_2.993103_g18189_i0 PRJNA977246 19181 319 2.993103 9.54799857 Minisyncoccota bacterium 2053589 Bacteria Bacteria 311 4.47e-80   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g18189 i0 84.858 114.984326018809 317 39 97 8 3 313 443662 443975 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 36680 311 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
951797 951797 PRJNA977246_S_NODE_8381_length_538_cov_8.754420_g7522_i0 PRJNA977246 8381 538 8.75442 47.0987796 uncultured candidate division SR1 bacterium 221237 Bacteria Bacteria 580 5.4499999999999985e-161   NTclustered gi|336020567|gb|JF917288.1| 221237 g7522 i0 88.32 94.1486988847584 488 52 90 5 53 538 115 599 Uncultured candidate division SR1 bacterium clone B1Q1E-91f-JRD28 16S ribosomal RNA gene, partial sequence blastn 50652 580 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         uncultured candidate division SR1 bacterium
2227238 2227238 PRJNA977246_S_NODE_9262_length_506_cov_7.582809_g8364_i0 PRJNA977246 9262 506 7.582809 38.36901354 Pseudomonadati 3379134 Bacteria Bacteria 119 5.6399999999999995e-30   NR OJU87881.1 1895829 g8364 i0 80.6 3.41501976284585 72 14 42.7 0 283 498 1 72 OJU87881.1 MAG: DNA repair protein RecO [Candidatus Saccharibacteria bacterium 49-20] diamond 1728 120 0.991666666666667 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
4779413 4779413 PRJNA977246_S_NODE_26664_length_249_cov_3.595455_g25672_i0 PRJNA977246 26664 249 3.595455 8.95268295 candidate division TM6 bacterium GW2011_GWF2_28_16 1619077 Bacteria Bacteria 261 3.44e-65   NTclustered gi|837367205|gb|CP011212.1| 1619077 g25672 i0 86.475 64.5502008032128 244 26 95 5 1 237 133935 134178 Candidate division TM6 bacterium GW2011_GWF2_28_16 chromosome, complete genome blastn 16073 261 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWF2_28_16
4779673 4779673 PRJNA977246_S_NODE_3684_length_874_cov_8.274556_g3184_i0 PRJNA977246 3684 874 8.274556 72.31961944 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 522 1.6999999999999999e-174   NR HEU4370582.1 2072417 g3184 i0 96.1 2.87986270022883 280 11 96.1 0 862 23 141 420 HEU4370582.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 2517 522 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
4780035 4780035 PRJNA977246_S_NODE_7304_length_582_cov_6767.213382_g6500_i0 PRJNA977246 7304 582 6767.213382 39385.18188324 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 77.4 6.14e-13   NR MBR3138001.1 2026720 g6500 i0 42.9 0.469072164948454 91 48 44.8 1 499 239 201 291 MBR3138001.1 adenine-specific methyltransferase EcoRI family protein [Candidatus Saccharibacteria bacterium] diamond 273 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
6054972 6054972 PRJNA977246_S_NODE_4605_length_763_cov_11.337875_g4013_i0 PRJNA977246 4605 763 11.337875 86.50798625 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 804 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g4013 i0 86.28 88.0943643512451 758 83 98 20 1 746 128834 129582 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 67216 804 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
6372800 6372800 PRJNA977246_S_NODE_16665_length_350_cov_5931.077882_g15673_i0 PRJNA977246 16665 350 5931.077882 20758.772587 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 77 4.42e-16   NR HCH34397.1 2026720 g15673 i0 67.2 0.497142857142857 58 19 49.7 0 30 203 1 58 HCH34397.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 174 77 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
9879216 9879216 PRJNA977246_S_NODE_23248_length_277_cov_11.588710_g22256_i0 PRJNA977246 23248 277 11.58871 32.1007267 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 379 1.03e-100   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g22256 i0 91.697 74 277 18 99 3 5 277 217527 217252 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 20498 379 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
11154350 11154350 PRJNA977246_S_NODE_13249_length_409_cov_7.468421_g12269_i0 PRJNA977246 13249 409 7.468421 30.54584189 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 71.6 3.61e-13   NR MCX6746401.1 2762014 g12269 i0 68.9 0.997555012224939 45 14 33 0 43 177 28 72 MCX6746401.1 thioredoxin [Candidatus Parcubacteria bacterium] diamond 408 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
11154629 11154629 PRJNA977246_S_NODE_23249_length_277_cov_11.181452_g22257_i0 PRJNA977246 23249 277 11.181452 30.97262204 candidate division TM6 bacterium Zodletone_IIa 1511133 Bacteria Bacteria 169 7.38e-48   NR KHD90091.1 1511133 g22257 i0 100 0.877256317689531 81 0 87.7 0 34 276 114 194 KHD90091.1 hypothetical protein AH06_02050, partial [candidate division TM6 bacterium Zodletone_IIa] diamond 243 169 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium Zodletone_IIa
12430701 12430701 PRJNA977246_S_NODE_35010_length_201_cov_3.796512_g34018_i0 PRJNA977246 35010 201 3.796512 7.63098912 candidate division TM6 bacterium GW2011_GWF2_28_16 1619077 Bacteria Bacteria 159 1e-34   NTclustered gi|837367205|gb|CP011212.1| 1619077 g34018 i0 93.458 1.11442786069652 107 7 53 0 95 201 134302 134408 Candidate division TM6 bacterium GW2011_GWF2_28_16 chromosome, complete genome blastn 224 159 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWF2_28_16
21352998 21352998 PRJNA977246_S_NODE_16717_length_350_cov_3.716511_g15725_i0 PRJNA977246 16717 350 3.716511 13.0077885 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 213 1.43e-50   NTclustered gi|2258832001|gb|CP060225.1| 2053688 g15725 i0 78.235 15.4257142857143 340 68 96 6 12 348 625929 626265 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome blastn 5399 213 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
21671505 21671505 PRJNA977246_S_NODE_9137_length_510_cov_3839.000000_g8246_i0 PRJNA977246 9137 510 3839 19578.9 Patescibacteria group bacterium 2052139 Bacteria Bacteria 262 7.83e-82   NR MFH1866664.1 2052139 g8246 i0 89.3 2.62941176470588 149 16 87.6 0 23 469 85 233 MFH1866664.1 ATPase, T2SS/T4P/T4SS family [Patescibacteria group bacterium] diamond 1341 262 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
23903296 23903296 PRJNA977246_S_NODE_10139_length_480_cov_392.396896_g9214_i0 PRJNA977246 10139 480 392.396896 1883.5051008 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 228 6.180000000000001e-70   NR HSX81222.1 2890869 g9214 i0 77.9 0.93125 149 33 93.1 0 478 32 135 283 HSX81222.1 IS110 family transposase [Candidatus Saccharimonadia bacterium] diamond 447 228 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
23904164 23904164 PRJNA977246_S_NODE_4599_length_764_cov_4.605442_g4007_i0 PRJNA977246 4599 764 4.605442 35.18557688 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 396 3.069999999999999e-105   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g4007 i0 78.493 33.8390052356021 637 113 82 24 1 624 449869 449244 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 25853 396 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
26614389 26614389 PRJNA977246_S_NODE_14701_length_383_cov_3.677966_g13712_i0 PRJNA977246 14701 383 3.677966 14.08660978 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 164 1.49e-49   NR OYX53575.1 1970481 g13712 i0 88 0.720626631853786 92 11 72.1 0 17 292 50 141 OYX53575.1 MAG: 50S ribosomal protein L11 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 276 164 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
27689967 27689967 PRJNA977246_S_NODE_17424_length_340_cov_3.051447_g16432_i0 PRJNA977246 17424 340 3.051447 10.3749198 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 69.7 5.03e-12   NR OYX53791.1 1970481 g16432 i0 39.1 0.767647058823529 87 52 75.9 1 338 81 69 155 OYX53791.1 MAG: hypothetical protein B7Y92_01730 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 261 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
28510522 28510522 PRJNA977246_S_NODE_37687_length_190_cov_2.900621_g36695_i0 PRJNA977246 37687 190 2.900621 5.5111799 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 69.3 2.39e-13   NR HJY84849.1 2838779 g36695 i0 65.2 0.726315789473684 46 14 69.5 1 2 133 66 111 HJY84849.1 hypothetical protein [Candidatus Binatia bacterium] diamond 138 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28542285 28542285 PRJNA977246_S_NODE_32727_length_212_cov_2.540984_g31735_i0 PRJNA977246 32727 212 2.540984 5.38688608 Candidatus Wallbacteria bacterium GWC2_49_35 1817813 Bacteria Bacteria 82.4 9.38e-18   NR OGM07266.1 1817813 g31735 i0 52.9 1.9811320754717 70 33 99.1 0 212 3 18 87 OGM07266.1 MAG: hypothetical protein A2008_00090 [Candidatus Wallbacteria bacterium GWC2_49_35] diamond 420 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium GWC2_49_35
29394624 29394624 PRJNA977246_S_NODE_24629_length_265_cov_4.800847_g23637_i0 PRJNA977246 24629 265 4.800847 12.72224455 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 156 2.1099999999999998e-43   NR HSX81222.1 2890869 g23637 i0 82.1 0.950943396226415 84 15 95.1 0 253 2 57 140 HSX81222.1 IS110 family transposase [Candidatus Saccharimonadia bacterium] diamond 252 156 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
29615264 29615264 PRJNA977246_S_NODE_33350_length_209_cov_2.438889_g32358_i0 PRJNA977246 33350 209 2.438889 5.09727801 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 104 4.56e-25   NR OYX53762.1 1970481 g32358 i0 89.5 0.818181818181818 57 6 81.8 0 5 175 267 323 OYX53762.1 MAG: hypothetical protein B7Y92_01580 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 171 104 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
29678392 29678392 PRJNA977246_S_NODE_30610_length_223_cov_3.221649_g29618_i0 PRJNA977246 30610 223 3.221649 7.18427727 candidate division SR1 bacterium 2044938 Bacteria Bacteria 42.7 0.00557   NR PID34526.1 2044938 g29618 i0 73.9 1.23766816143498 23 6 30.9 0 130 62 3 25 PID34526.1 MAG: hypothetical protein CR971_02820 [candidate division SR1 bacterium] diamond 276 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
29709943 29709943 PRJNA977246_S_NODE_32930_length_211_cov_2.175824_g31938_i0 PRJNA977246 32930 211 2.175824 4.59098864 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 64.3 4.86e-10   NR MBA3954579.1 2030827 g31938 i0 47.1 4.4218009478673 70 37 99.5 0 211 2 73 142 MBA3954579.1 hypothetical protein [Candidatus Dependentiae bacterium] diamond 933 64.3 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
29811028 29811028 PRJNA977246_S_NODE_42211_length_174_cov_3.055172_g41219_i0 PRJNA977246 42211 174 3.055172 5.31599928 Bacillati 1783272 Bacteria Bacteria 82.8 7.69e-17   NR RMF92142.1 2419984 g41219 i0 66.7 3.91379310344828 57 19 98.3 0 172 2 328 384 RMF92142.1 MAG: hypothetical protein D6734_12940, partial [Candidatus Schekmanbacteria bacterium] diamond 681 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium
30026288 30026288 PRJNA977246_S_NODE_44311_length_168_cov_2.294964_g43319_i0 PRJNA977246 44311 168 2.294964 3.85553952 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 61.2 1.04e-9   NR HEY0965628.1 2973664 g43319 i0 60 0.803571428571429 45 18 80.4 0 137 3 16 60 HEY0965628.1 GNAT family N-acetyltransferase [Candidatus Saccharimonadales bacterium] diamond 135 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30152266 30152266 PRJNA977246_S_NODE_44212_length_168_cov_3.172662_g43220_i0 PRJNA977246 44212 168 3.172662 5.33007216 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 48.5 1.17e-4   NR QQS17319.1 2026720 g43220 i0 91.7 0.428571428571429 24 2 42.9 0 74 3 4 27 QQS17319.1 MAG: thymidylate synthase [Candidatus Saccharibacteria bacterium] diamond 72 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30342630 30342630 PRJNA977246_S_NODE_40032_length_181_cov_4.052632_g39040_i0 PRJNA977246 40032 181 4.052632 7.33526392 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 42.7 0.00405   NR HCB52168.1 2044595 g39040 i0 54.5 0.546961325966851 33 15 54.7 0 132 34 30 62 HCB52168.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 99 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30847636 30847636 PRJNA977246_S_NODE_24814_length_264_cov_2.544681_g23822_i0 PRJNA977246 24814 264 2.544681 6.71795784 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.7 3.36e-7   NR MEZ0208561.1 2053589 g23822 i0 29.8 0.954545454545455 84 59 95.5 0 11 262 16 99 MEZ0208561.1 GNAT family N-acetyltransferase [Candidatus Paceibacterota bacterium] diamond 252 54.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31137845 31137845 PRJNA977246_S_NODE_24035_length_270_cov_3.738589_g23043_i0 PRJNA977246 24035 270 3.738589 10.0941903 Bacteria 2 Bacteria Bacteria 121 4.59e-30   NR MEK7629453.1 2052139 g23043 i0 62.4 8.45555555555556 85 32 94.4 0 256 2 377 461 MEK7629453.1 DNA methyltransferase [Patescibacteria group bacterium] diamond 2283 122 0.991803278688525 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31422723 31422723 PRJNA977246_S_NODE_46116_length_163_cov_2.798507_g45124_i0 PRJNA977246 46116 163 2.798507 4.56156641 Bacteria 2 Bacteria Bacteria 90.5 4.14e-20   NR OYX53696.1 1970481 g45124 i0 90.2 1.87730061349693 51 5 93.9 0 162 10 79 129 OYX53696.1 MAG: hypothetical protein B7Y92_02015 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 306 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
31448251 31448251 PRJNA977246_S_NODE_36756_length_194_cov_2.012121_g35764_i0 PRJNA977246 36756 194 2.012121 3.90351474 Candidatus Microgenomates bacterium 2093373 Bacteria Bacteria 42 0.0057   NR MBI4100092.1 2093373 g35764 i0 70.4 0.896907216494845 27 8 41.8 0 8 88 31 57 MBI4100092.1 translation initiation factor IF-1 [Candidatus Microgenomates bacterium] diamond 174 42 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Candidatus Microgenomates bacterium
31890994 31890994 PRJNA977246_S_NODE_37717_length_190_cov_2.565217_g36725_i0 PRJNA977246 37717 190 2.565217 4.8739123 candidate division SR1 bacterium 2044938 Bacteria Bacteria 53.1 4.56e-7   NR MCX6822792.1 2044938 g36725 i0 61 1.29473684210526 41 16 64.7 0 125 3 1 41 MCX6822792.1 hypothetical protein [candidate division SR1 bacterium] diamond 246 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;