RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA976345", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA976345 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4777015 4777015 PRJNA976345_P_NODE_68864_length_218_cov_1.300546_g67256_i0 PRJNA976345 68864 218 1.300546 2.83519028 Sobelivirales sp. 2809868 Viruses Viruses 252 1.77e-62   NTclustered gi|2647548694|gb|OR843429.1| 2809868 g67256 i0 87.671 2.00917431192661 219 24 99 2 1 216 5646 5428 Sobelivirales sp. strain MR644-18D/28050 polyprotein and hypothetical protein genes, complete cds blastn 438 252 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.
20074433 20074433 PRJNA976345_P_NODE_137276_length_172_cov_1.474453_g135668_i0 PRJNA976345 137276 172 1.474453 2.53605916 Sapovirus sp. 1906670 Viruses Viruses 165 1.78e-36   NTclustered gi|2196304084|gb|MZ679047.1| 1906670 g135668 i0 87.413 284.970930232558 143 18 83 0 28 170 1616 1474 MAG: Sapovirus sp. isolate R16-k141_22382 polyprotein gene, partial cds blastn 49015 165 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae Sapovirus Sapovirus sp.
28769125 28769125 PRJNA976345_P_NODE_3387_length_1125_cov_3.286239_g2358_i0 PRJNA976345 3387 1125 3.286239 36.97018875 Viruses 10239 Viruses Viruses 125 8.27e-28   NR UDL14431.1 1955170 g2358 i0 31.4 1.59466666666667 309 190 80.5 7 911 6 187 480 UDL14431.1 MAG: putative coat protein [Partitiviridae sp.] diamond 1794 125 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
30310917 30310917 PRJNA976345_P_NODE_24832_length_338_cov_1.438944_g23229_i0 PRJNA976345 24832 338 1.438944 4.86363072 Sophora japonica powdery mildew-associated partitivirus 1891704 Viruses Viruses 169 1.75e-47   NR YP_009272945.1 1891704 g23229 i0 73.6 1.95266272189349 110 29 97.6 0 332 3 392 501 YP_009272945.1 putative coat protein [Sophora japonica powdery mildew-associated partitivirus] diamond 660 169 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Sophora japonica powdery mildew-associated partitivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;