RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA976345" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA976345 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28516687 28516687 PRJNA976345_P_NODE_36027_length_284_cov_4.686747_g34420_i0 PRJNA976345 36027 284 4.686747 13.31036148 Opisthokonta 33154 Fungi Fungi 92 2.89e-19   NR KAF9758282.1 83296 g34420 i0 44.6 5.8943661971831 92 51 97.2 0 1 276 320 411 KAF9758282.1 Retrovirus-related Pol polyprotein from transposon, partial [Nosema granulosis] diamond 1674 92.4 0.995670995670996 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
28920715 28920715 PRJNA976345_P_NODE_47988_length_251_cov_4.342593_g46380_i0 PRJNA976345 47988 251 4.342593 10.89990843 Hamiltosporidium tvaerminnensis 1176355 Fungi Fungi 43.9 0.0162   NR TBU20516.1 1176355 g46380 i0 35.7 0.836653386454183 70 33 83.7 2 26 235 91 148 TBU20516.1 hypothetical protein CWI38_0058p0020 [Hamiltosporidium tvaerminnensis] diamond 210 43.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Dubosqiidae Hamiltosporidium Hamiltosporidium tvaerminnensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;