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contig_metadata

11 rows where bioproject = "PRJNA976345", tax_phylum = "Methanobacteriota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 11 ✖

tax_phylum 1

  • Methanobacteriota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA976345 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2224019 2224019 PRJNA976345_P_NODE_61802_length_227_cov_1.739583_g60194_i0 PRJNA976345 61802 227 1.739583 3.94885341 Methanolobus sp. ZRKC2 3125783 Archaea Archaea 52.8 0.02   NTclustered gi|2708450131|gb|CP146980.1| 3125783 g60194 i0 100 0.123348017621145 28 0 12 0 8 35 205498 205525 Methanolobus sp. ZRKC2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp. ZRKC2
8601598 8601598 PRJNA976345_P_NODE_59347_length_230_cov_3.482051_g57739_i0 PRJNA976345 59347 230 3.482051 8.0087173 Candidatus Methanospirare jalkutatii 2977098 Archaea Archaea 52.8 0.021   NTclustered gi|2324523409|gb|CP110382.1| 2977098 g57739 i0 100 0.243478260869565 28 0 12 0 16 43 296054 296081 MAG: Candidatus Methanospirare jalkutatii isolate FWG175 chromosome blastn 56 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanospirareceae Candidatus Methanospirare Candidatus Methanospirare jalkutatii
14975729 14975729 PRJNA976345_P_NODE_138692_length_171_cov_2.080882_g137084_i0 PRJNA976345 138692 171 2.080882 3.55830822 uncultured Methanobacterium sp. 176306 Archaea Archaea 54.7 0.004   NTclustered gi|2621703503|emb|OY762552.1| 176306 g137084 i0 96.97 0.192982456140351 33 0 19 1 21 53 1272314 1272283 MAG: uncultured Methanobacterium sp. isolate 3f2017ab-9e69-417f-80a5-32741c1572f8 genome assembly, chromosome: 1 blastn 33 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.
15294887 15294887 PRJNA976345_P_NODE_119612_length_178_cov_2.895105_g118004_i0 PRJNA976345 119612 178 2.895105 5.1532869 root 1 Root_unresolved Root_unresolved 52.8 0.015   NTclustered gi|2105355784|gb|CP084090.1| 1586233 g118004 i0 100 0.353932584269663 28 0 16 0 22 49 706159 706186 Halomicrobium urmianum strain IBRC-M: 10911 chromosome, complete genome blastn 63 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium urmianum
22624851 22624851 PRJNA976345_P_NODE_131238_length_175_cov_1.307143_g129630_i0 PRJNA976345 131238 175 1.307143 2.28750025 Methanochimaera problematica 2609417 Archaea Archaea 52.8 0.015   NTclustered gi|2594454307|gb|CP043875.1| 2609417 g129630 i0 100 0.16 28 0 16 0 119 146 491879 491906 Methanochimaera problematica strain FWC-SCC4 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanochimaera Methanochimaera problematica
23901457 23901457 PRJNA976345_P_NODE_84219_length_202_cov_1.670659_g82611_i0 PRJNA976345 84219 202 1.670659 3.37473118 Natrarchaeobaculum aegyptiacum 745377 Archaea Archaea 62.1 2.92e-5   NTclustered gi|1196598842|gb|CP019893.1| 745377 g82611 i0 92.857 0.207920792079208 42 3 21 0 67 108 2705856 2705815 Natrarchaeobaculum aegyptiacum strain JW/NM-HA 15 chromosome, complete genome blastn 42 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobaculum Natrarchaeobaculum aegyptiacum
25174290 25174290 PRJNA976345_P_NODE_21620_length_362_cov_2.941896_g20020_i0 PRJNA976345 21620 362 2.941896 10.64966352 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 58.4 7.38e-4   NTclustered gi|2874253858|emb|OY969914.1| 176233 g20020 i0 97.059 0.0939226519337017 34 1 9 0 252 285 2212723 2212690 MAG: uncultured Methanobacteriaceae archaeon isolate MFD02416.bin.1.248 genome assembly, chromosome: 1 blastn 34 58.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
27405531 27405531 PRJNA976345_P_NODE_96583_length_192_cov_2.031847_g94975_i0 PRJNA976345 96583 192 2.031847 3.90114624 Methanocorpusculum sp. 2058474 Archaea Archaea 43.9 0.00708   NR HJJ77687.1 2058474 g94975 i0 46.3 0.640625 41 22 64.1 0 126 4 4 44 HJJ77687.1 hypothetical protein [Methanocorpusculum sp.] diamond 123 43.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
28542167 28542167 PRJNA976345_P_NODE_146927_length_167_cov_3.689394_g145319_i0 PRJNA976345 146927 167 3.689394 6.16128798 Methanocaldococcus sp. 2152917 Archaea Archaea 46.2 7.88e-4   NR WP_297317778.1 2152917 g145319 i0 44.9 0.880239520958084 49 27 88 0 6 152 50 98 WP_297317778.1 GTPase [Methanocaldococcus sp.] diamond 147 46.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus sp.
29205166 29205166 PRJNA976345_P_NODE_100889_length_189_cov_1.961039_g99281_i0 PRJNA976345 100889 189 1.961039 3.70636371 Archaeoglobaceae archaeon 2511821 Archaea Archaea 91.3 1.49e-19   NR MCS7121671.1 2511821 g99281 i0 70.5 8.96825396825397 61 18 96.8 0 183 1 430 490 MCS7121671.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Archaeoglobaceae archaeon] diamond 1695 91.3 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
32681095 32681095 PRJNA976345_P_NODE_112320_length_182_cov_1.619048_g110712_i0 PRJNA976345 112320 182 1.619048 2.94666736 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 45.8 0.0013   NR WP_288267568.1 253161 g110712 i0 50 0.659340659340659 40 20 65.9 0 31 150 257 296 WP_288267568.1 RHS repeat-associated core domain-containing protein [uncultured Methanobrevibacter sp.] diamond 120 45.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;