RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA976345" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA976345 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12427771 12427771 PRJNA976345_P_NODE_46050_length_256_cov_1.986425_g44442_i0 PRJNA976345 46050 256 1.986425 5.085248 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 405 1.55e-108   NTclustered gi|2031939661|emb|OD957602.1| 5763 g44442 i0 95.019 61.59375 261 8 100 1 1 256 231 491 Naegleria fowleri Karachi_NF001 strain blastn 15768 405 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
13702128 13702128 PRJNA976345_P_NODE_38171_length_277_cov_3.351240_g36564_i0 PRJNA976345 38171 277 3.35124 9.2829348 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.025   NTclustered gi|2119417205|ref|XM_044687182.1| 51637 g36564 i0 100 0.101083032490975 28 0 10 0 145 172 1253 1280 Naegleria lovaniensis uncharacterized protein (C9374_011518), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
21350298 21350298 PRJNA976345_P_NODE_22937_length_351_cov_3.018987_g21336_i0 PRJNA976345 22937 351 3.018987 10.59664437 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 189 2.4199999999999992e-43   NTclustered gi|2031941191|emb|OD957845.1| 5763 g21336 i0 83.41 0.618233618233618 217 22 59 5 1 207 122 334 Naegleria fowleri Karachi_NF001 strain blastn 217 189 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25174318 25174318 PRJNA976345_P_NODE_23280_length_348_cov_4.530351_g21679_i0 PRJNA976345 23280 348 4.530351 15.76562148 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 219 3.07e-52   NTclustered gi|2031941502|emb|OD957913.1| 5763 g21679 i0 95 4.41666666666667 140 5 84 2 1 140 138 1 Naegleria fowleri Karachi_NF001 strain blastn 1537 219 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27405463 27405463 PRJNA976345_P_NODE_110403_length_183_cov_1.912162_g108795_i0 PRJNA976345 110403 183 1.912162 3.49925646 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 71.2 1.43e-12   NR XP_002669531.1 5762 g108795 i0 56.7 0.983606557377049 60 26 98.4 0 2 181 170 229 XP_002669531.1 uncharacterized protein NAEGRDRAFT_59916 [Naegleria gruberi] diamond 180 71.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29299770 29299770 PRJNA976345_P_NODE_48849_length_250_cov_1.106977_g47241_i0 PRJNA976345 48849 250 1.106977 2.7674425 Acrasis kona 1008807 Heterolobosea other_Eukaryota 60.1 3.11e-8   NR KAL0486982.1 1008807 g47241 i0 41.3 0.96 80 44 92.4 1 250 20 376 455 KAL0486982.1 low-specificity L-threonine aldolase [Acrasis kona] diamond 240 60.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29457325 29457325 PRJNA976345_P_NODE_62650_length_226_cov_1.246073_g61042_i0 PRJNA976345 62650 226 1.246073 2.81612498 Acrasis kona 1008807 Heterolobosea other_Eukaryota 78.2 1.55e-15   NR KAL0485169.1 1008807 g61042 i0 48.7 1.00884955752212 76 36 98.2 2 3 224 59 133 KAL0485169.1 hypothetical protein AKO1_004281 [Acrasis kona] diamond 228 78.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30500005 30500005 PRJNA976345_P_NODE_165853_length_160_cov_1.880000_g164245_i0 PRJNA976345 165853 160 1.88 3.008 Acrasis kona 1008807 Heterolobosea other_Eukaryota 88.6 7.8e-19   NR KAL0487357.1 1008807 g164245 i0 78.4 0.95625 51 11 95.6 0 157 5 284 334 KAL0487357.1 aquaporin [Acrasis kona] diamond 153 88.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32270795 32270795 PRJNA976345_P_NODE_67358_length_219_cov_3.820652_g65750_i0 PRJNA976345 67358 219 3.820652 8.36722788 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.2 0.00132   NR XP_044563551.1 5763 g65750 i0 38.2 1.86301369863014 68 39 89 2 2 196 35 102 XP_044563551.1 uncharacterized protein FDP41_001908 [Naegleria fowleri] diamond 408 46.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;