RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA976345" and tax_phylum = "Commensaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Commensaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA976345 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2543094 2543094 PRJNA976345_P_NODE_5942_length_750_cov_9.671329_g2245_i1 PRJNA976345 5942 750 9.671329 72.5349675 Anelloviridae 687329 Viruses Viruses 56.5 0.006   NTclustered gi|307341607|gb|HM633235.1| 687387 g2245 i1 100 0.602666666666667 30 0 4 0 278 307 2599 2628 Torque teno sus virus 2 isolate TTV2Ln13, complete genome blastn 452 56.5 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Iotatorquevirus Iotatorquevirus suida1a
7645335 7645335 PRJNA976345_P_NODE_3246_length_1166_cov_9.759505_g2245_i0 PRJNA976345 3246 1166 9.759505 113.7958283 Anelloviridae 687329 Viruses Viruses 56.5 0.009   NTclustered gi|307341607|gb|HM633235.1| 687387 g2245 i0 100 0.387650085763293 30 0 3 0 860 889 2628 2599 Torque teno sus virus 2 isolate TTV2Ln13, complete genome blastn 452 56.5 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Iotatorquevirus Iotatorquevirus suida1a

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;