contig_metadata
36 rows where bioproject = "PRJNA976345", tax_phylum = "Campylobacterota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2543127 | 2543127 | PRJNA976345_P_NODE_66122_length_221_cov_1.919355_g64514_i0 | PRJNA976345 | 66122 | 221 | 1.919355 | 4.24177455 | Campylobacter | 194 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|2878685948|gb|CP176586.1| | 201 | g64514 | i0 | 100 | 0.633484162895928 | 28 | 0 | 13 | 0 | 77 | 104 | 1237138 | 1237111 | Campylobacter lari strain S3:65 chromosome, complete genome | blastn | 140 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter lari | ||
| 4777172 | 4777172 | PRJNA976345_P_NODE_88504_length_198_cov_2.453988_g86896_i0 | PRJNA976345 | 88504 | 198 | 2.453988 | 4.85889624 | Campylobacter geochelonis | 1780362 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|1847322497|gb|CP053844.1| | 1780362 | g86896 | i0 | 96.97 | 0.166666666666667 | 33 | 0 | 17 | 1 | 89 | 121 | 765924 | 765955 | Campylobacter geochelonis strain LMG 29375 chromosome, complete genome | blastn | 33 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter geochelonis | ||
| 6371091 | 6371091 | PRJNA976345_P_NODE_132725_length_174_cov_1.705036_g131117_i0 | PRJNA976345 | 132725 | 174 | 1.705036 | 2.96676264 | Campylobacter | 194 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|1919202701|gb|CP063091.1| | 374106 | g131117 | i0 | 100 | 0.32183908045977 | 28 | 0 | 16 | 0 | 15 | 42 | 780470 | 780443 | Campylobacter cuniculorum strain 2010D-8469 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter cuniculorum | ||
| 6371206 | 6371206 | PRJNA976345_P_NODE_164825_length_160_cov_3.400000_g163217_i0 | PRJNA976345 | 164825 | 160 | 3.4 | 5.44 | Campylobacter | 194 | Bacteria | Bacteria | 296 | 5.55e-76 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g163217 | i0 | 100 | 248 | 160 | 0 | 100 | 0 | 1 | 160 | 30848 | 30689 | Campylobacter showae genome assembly, plasmid: V | blastn | 39680 | 296 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 7325848 | 7325848 | PRJNA976345_P_NODE_160586_length_162_cov_1.748031_g158978_i0 | PRJNA976345 | 160586 | 162 | 1.748031 | 2.83181022 | Helicobacter hepaticus | 32025 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|32263428|gb|AE017125.1| | 235279 | g158978 | i0 | 96.875 | 0.197530864197531 | 32 | 0 | 19 | 1 | 123 | 153 | 1274532 | 1274563 | Helicobacter hepaticus ATCC 51449, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter hepaticus | ||
| 8600685 | 8600685 | PRJNA976345_P_NODE_129767_length_175_cov_3.028571_g128159_i0 | PRJNA976345 | 129767 | 175 | 3.028571 | 5.29999925 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2304194449|gb|CP012234.1| | 197 | g128159 | i0 | 96.774 | 0.177142857142857 | 31 | 1 | 18 | 0 | 8 | 38 | 361803 | 361773 | Campylobacter jejuni strain CJ048CCUA, complete genome | blastn | 31 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 8600857 | 8600857 | PRJNA976345_P_NODE_157047_length_163_cov_2.554688_g155439_i0 | PRJNA976345 | 157047 | 163 | 2.554688 | 4.16414144 | Arcobacter ellisii | 913109 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1474793334|gb|CP032097.1| | 913109 | g155439 | i0 | 97.059 | 0.208588957055215 | 34 | 0 | 20 | 1 | 42 | 74 | 792009 | 791976 | Arcobacter ellisii strain LMG 26155 chromosome, complete genome | blastn | 34 | 56.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter ellisii | ||
| 9876434 | 9876434 | PRJNA976345_P_NODE_23988_length_343_cov_2.772727_g22387_i0 | PRJNA976345 | 23988 | 343 | 2.772727 | 9.51045361 | Thiomicrolovo sulfuroxydans | 2894755 | Bacteria | Bacteria | 60.2 | 1.94e-4 | NTclustered | gi|2159817265|gb|CP087998.1| | 2894755 | g22387 | i0 | 94.872 | 0.113702623906706 | 39 | 0 | 11 | 2 | 269 | 305 | 2349088 | 2349050 | Sulfurimonas sp. HSL-3221 chromosome, complete genome | blastn | 39 | 60.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Thiomicrolovo | Thiomicrolovo sulfuroxydans | ||
| 9876901 | 9876901 | PRJNA976345_P_NODE_68608_length_218_cov_1.797814_g67000_i0 | PRJNA976345 | 68608 | 218 | 1.797814 | 3.91923452 | Helicobacter pylori | 210 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|1959466958|gb|CP051510.1| | 210 | g67000 | i0 | 100 | 0.256880733944954 | 28 | 0 | 13 | 0 | 191 | 218 | 1025059 | 1025032 | Helicobacter pylori strain ASHA-008 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 13701689 | 13701689 | PRJNA976345_P_NODE_165691_length_160_cov_1.944000_g164083_i0 | PRJNA976345 | 165691 | 160 | 1.944 | 3.1104 | Helicobacter pylori | 210 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|2642602177|gb|CP079377.1| | 210 | g164083 | i0 | 100 | 0.91875 | 28 | 0 | 18 | 0 | 39 | 66 | 112093 | 112120 | Helicobacter pylori strain HpGP-MAL-017 chromosome, complete genome | blastn | 147 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 14020856 | 14020856 | PRJNA976345_P_NODE_136471_length_172_cov_2.167883_g134863_i0 | PRJNA976345 | 136471 | 172 | 2.167883 | 3.72875876 | Arcobacter | 28196 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g134863 | i0 | 100 | 0.337209302325581 | 29 | 0 | 17 | 0 | 105 | 133 | 656131 | 656159 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 58 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 15295423 | 15295423 | PRJNA976345_P_NODE_79392_length_206_cov_2.619883_g77784_i0 | PRJNA976345 | 79392 | 206 | 2.619883 | 5.39695898 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 104 | 4.9e-18 | NTclustered | gi|1444880815|gb|CP012212.1| | 197 | g77784 | i0 | 86.458 | 10.121359223301 | 96 | 11 | 46 | 2 | 104 | 198 | 1672319 | 1672413 | Campylobacter jejuni strain CJ017CCUA, complete genome | blastn | 2085 | 104 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16250798 | 16250798 | PRJNA976345_P_NODE_152433_length_165_cov_1.984615_g150825_i0 | PRJNA976345 | 152433 | 165 | 1.984615 | 3.27461475 | Arcobacter ellisii | 913109 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|1474793334|gb|CP032097.1| | 913109 | g150825 | i0 | 100 | 0.16969696969697 | 28 | 0 | 17 | 0 | 119 | 146 | 2226970 | 2226997 | Arcobacter ellisii strain LMG 26155 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter ellisii | ||
| 18800735 | 18800735 | PRJNA976345_P_NODE_94375_length_194_cov_1.440252_g92767_i0 | PRJNA976345 | 94375 | 194 | 1.440252 | 2.79408888 | Arcobacter defluvii | 873191 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g92767 | i0 | 100 | 0.149484536082474 | 29 | 0 | 15 | 0 | 23 | 51 | 1318877 | 1318905 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 20074314 | 20074314 | PRJNA976345_P_NODE_115176_length_180_cov_2.489655_g113568_i0 | PRJNA976345 | 115176 | 180 | 2.489655 | 4.481379 | Helicobacter pylori | 210 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|1214879959|emb|LT635474.1| | 210 | g113568 | i0 | 100 | 4.51111111111111 | 28 | 0 | 16 | 0 | 59 | 86 | 532013 | 532040 | Helicobacter pylori isolate HE171/09 genome assembly, chromosome: I | blastn | 812 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 20393775 | 20393775 | PRJNA976345_P_NODE_6016_length_744_cov_20.440056_g4692_i0 | PRJNA976345 | 6016 | 744 | 20.440056 | 152.07401664 | Campylobacter | 194 | Bacteria | Bacteria | 1208 | 0 | NTclustered | gi|240265854|gb|GQ167691.1| | 827 | g4692 | i0 | 96.211 | 233.513440860215 | 739 | 26 | 99 | 2 | 1 | 738 | 1511 | 774 | Bacteroides ureolyticus strain UNSWE 23S ribosomal RNA gene, partial sequence | blastn | 173734 | 1208 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 21350570 | 21350570 | PRJNA976345_P_NODE_43837_length_261_cov_2.862832_g42229_i0 | PRJNA976345 | 43837 | 261 | 2.862832 | 7.47199152 | Malaciobacter marinus | 505249 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|1474785413|gb|CP032101.1| | 505249 | g42229 | i0 | 96.875 | 0.122605363984674 | 32 | 0 | 12 | 1 | 202 | 233 | 153696 | 153726 | Malaciobacter marinus strain JCM 15502 chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter marinus | ||
| 21350935 | 21350935 | PRJNA976345_P_NODE_79537_length_206_cov_2.251462_g77929_i0 | PRJNA976345 | 79537 | 206 | 2.251462 | 4.63801172 | Campylobacter rectus | 203 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g77929 | i0 | 96.97 | 0.320388349514563 | 33 | 0 | 16 | 1 | 54 | 86 | 1147833 | 1147864 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 66 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 22625157 | 22625157 | PRJNA976345_P_NODE_18218_length_395_cov_2.222222_g16624_i0 | PRJNA976345 | 18218 | 395 | 2.222222 | 8.7777769 | Campylobacter sp. RM12651 | 1660079 | Bacteria | Bacteria | 54.7 | 0.011 | NTclustered | gi|2198381838|gb|CP059600.1| | 1660079 | g16624 | i0 | 96.97 | 0.0835443037974684 | 33 | 0 | 8 | 1 | 276 | 308 | 1094605 | 1094574 | Campylobacter sp. RM12651 chromosome, complete genome | blastn | 33 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM12651 | ||
| 25173774 | 25173774 | PRJNA976345_P_NODE_113220_length_181_cov_2.979452_g111612_i0 | PRJNA976345 | 113220 | 181 | 2.979452 | 5.39280812 | Arcobacteraceae bacterium | 2808971 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2621713474|emb|OY771505.1| | 2808971 | g111612 | i0 | 100 | 0.30939226519337 | 28 | 0 | 15 | 0 | 33 | 60 | 2475033 | 2475006 | MAG: Arcobacteraceae bacterium isolate 2add6294-6f5d-422d-8d5e-cb49cf879a66 genome assembly, chromosome: 1 | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacteraceae bacterium | |||
| 25174236 | 25174236 | PRJNA976345_P_NODE_192520_length_152_cov_1.307692_g190912_i0 | PRJNA976345 | 192520 | 152 | 1.307692 | 1.98769184 | Candidatus Campylobacter infans | 2561898 | Bacteria | Bacteria | 52.8 | 0.012 | NTclustered | gi|1870124224|gb|CP049075.1| | 2561898 | g190912 | i0 | 100 | 0.184210526315789 | 28 | 0 | 18 | 0 | 47 | 74 | 626661 | 626688 | Candidatus Campylobacter infans strain 19S00001 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Candidatus Campylobacter infans | ||
| 25174242 | 25174242 | PRJNA976345_P_NODE_194660_length_151_cov_1.844828_g193052_i0 | PRJNA976345 | 194660 | 151 | 1.844828 | 2.78569028 | Arcobacteraceae bacterium | 2808971 | Bacteria | Bacteria | 54.7 | 0.003 | NTclustered | gi|2621785505|emb|OY781963.1| | 2808971 | g193052 | i0 | 90.698 | 0.28476821192053 | 43 | 1 | 28 | 2 | 71 | 113 | 1055017 | 1054978 | MAG: Arcobacteraceae bacterium isolate 71d67385-9353-412f-8d24-32561d467f9a genome assembly, chromosome: 1 | blastn | 43 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacteraceae bacterium | |||
| 25174879 | 25174879 | PRJNA976345_P_NODE_75500_length_210_cov_2.445714_g73892_i0 | PRJNA976345 | 75500 | 210 | 2.445714 | 5.1359994 | Campylobacter hyointestinalis | 198 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|1861376917|gb|CP053828.1| | 91353 | g73892 | i0 | 100 | 0.133333333333333 | 28 | 0 | 13 | 0 | 105 | 132 | 1201188 | 1201215 | Campylobacter hyointestinalis subsp. lawsonii strain CHY5 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hyointestinalis | ||
| 26709183 | 26709183 | PRJNA976345_P_NODE_57381_length_233_cov_19.111111_g55773_i0 | PRJNA976345 | 57381 | 233 | 19.111111 | 44.52888863 | Helicobacter pylori | 210 | Bacteria | Bacteria | 103 | 7.45e-27 | NR | GAA9165282.1 | 210 | g55773 | i0 | 94 | 0.643776824034335 | 50 | 3 | 64.4 | 0 | 1 | 150 | 3 | 52 | GAA9165282.1 hypothetical protein Kyoto190A_5390 [Helicobacter pylori] | diamond | 150 | 103 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27626477 | 27626477 | PRJNA976345_P_NODE_140144_length_170_cov_6.318519_g138536_i0 | PRJNA976345 | 140144 | 170 | 6.318519 | 10.7414823 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.1 | 1.67e-12 | NR | GAA8948601.1 | 210 | g138536 | i0 | 100 | 0.511764705882353 | 29 | 0 | 51.2 | 0 | 1 | 87 | 17 | 45 | GAA8948601.1 hypothetical protein Kyoto181A_0400 [Helicobacter pylori] | diamond | 87 | 65.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27632601 | 27632601 | PRJNA976345_P_NODE_183844_length_154_cov_2.168067_g182236_i0 | PRJNA976345 | 183844 | 154 | 2.168067 | 3.33882318 | root | 1 | Root_unresolved | Root_unresolved | 48.9 | 2.53e-5 | NR | GAA8908272.1 | 210 | g182236 | i0 | 53.5 | 2.16233766233766 | 43 | 19 | 83.8 | 1 | 6 | 134 | 9 | 50 | GAA8908272.1 hypothetical protein Kyoto166A_1320 [Helicobacter pylori] | diamond | 333 | 48.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28390295 | 28390295 | PRJNA976345_P_NODE_77606_length_208_cov_2.034682_g75998_i0 | PRJNA976345 | 77606 | 208 | 2.034682 | 4.23213856 | Bacteria | 2 | Bacteria | Bacteria | 114 | 4.67e-29 | NR | WP_198936540.1 | 210 | g75998 | i0 | 76.5 | 7.84615384615385 | 68 | 16 | 98.1 | 0 | 206 | 3 | 8 | 75 | WP_198936540.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 1632 | 114 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29142087 | 29142087 | PRJNA976345_P_NODE_13509_length_464_cov_4.375291_g11935_i0 | PRJNA976345 | 13509 | 464 | 4.375291 | 20.30135024 | Sulfurovum sp. | 1969726 | Bacteria | Bacteria | 59.7 | 4.25e-7 | NR | MCB4762193.1 | 1969726 | g11935 | i0 | 27.7 | 2.73491379310345 | 141 | 89 | 89.2 | 4 | 458 | 45 | 301 | 431 | MCB4762193.1 endonuclease/exonuclease/phosphatase family protein [Sulfurovum sp.] | diamond | 1269 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum sp. | ||
| 29242858 | 29242858 | PRJNA976345_P_NODE_154489_length_164_cov_2.457364_g152881_i0 | PRJNA976345 | 154489 | 164 | 2.457364 | 4.03007696 | Bacteria | 2 | Bacteria | Bacteria | 113 | 4.44e-30 | NR | PUB99708.1 | 210 | g152881 | i0 | 100 | 3.95121951219512 | 54 | 0 | 98.8 | 0 | 1 | 162 | 108 | 161 | PUB99708.1 hypothetical protein C2S07_01860, partial [Helicobacter pylori] | diamond | 648 | 113 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30310908 | 30310908 | PRJNA976345_P_NODE_179192_length_156_cov_1.264463_g177584_i0 | PRJNA976345 | 179192 | 156 | 1.264463 | 1.97256228 | Helicobacter pylori | 210 | Bacteria | Bacteria | 63.2 | 1.76e-11 | NR | WP_316458338.1 | 210 | g177584 | i0 | 97.4 | 0.75 | 39 | 1 | 75 | 0 | 151 | 35 | 41 | 79 | WP_316458338.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 117 | 63.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31353308 | 31353308 | PRJNA976345_P_NODE_6176_length_733_cov_3.223496_g4835_i0 | PRJNA976345 | 6176 | 733 | 3.223496 | 23.62822568 | Sulfurovum sp. | 1969726 | Bacteria | Bacteria | 78.2 | 1.83e-12 | NR | MCB4781053.1 | 1969726 | g4835 | i0 | 32.7 | 1.67394270122783 | 211 | 118 | 81.4 | 9 | 696 | 100 | 59 | 257 | MCB4781053.1 reverse transcriptase family protein [Sulfurovum sp.] | diamond | 1227 | 78.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum sp. | ||
| 31511560 | 31511560 | PRJNA976345_P_NODE_21716_length_361_cov_4.343558_g20116_i0 | PRJNA976345 | 21716 | 361 | 4.343558 | 15.68024438 | Campylobacterota bacterium | 2026809 | Bacteria | Bacteria | 45.8 | 0.00995 | NR | RLA60805.1 | 2026809 | g20116 | i0 | 41.5 | 0.54016620498615 | 65 | 35 | 52.4 | 2 | 335 | 147 | 48 | 111 | RLA60805.1 MAG: hypothetical protein DRQ89_12255 [Campylobacterota bacterium] | diamond | 195 | 45.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Campylobacterota bacterium | ||||||
| 31897132 | 31897132 | PRJNA976345_P_NODE_144097_length_169_cov_1.276119_g142489_i0 | PRJNA976345 | 144097 | 169 | 1.276119 | 2.15664111 | Bacteria | 2 | Bacteria | Bacteria | 119 | 1.23e-32 | NR | PUB99708.1 | 210 | g142489 | i0 | 100 | 2.92899408284024 | 55 | 0 | 97.6 | 0 | 3 | 167 | 13 | 67 | PUB99708.1 hypothetical protein C2S07_01860, partial [Helicobacter pylori] | diamond | 495 | 119 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32017432 | 32017432 | PRJNA976345_P_NODE_108478_length_184_cov_2.234899_g106870_i0 | PRJNA976345 | 108478 | 184 | 2.234899 | 4.11221416 | Helicobacter pylori | 210 | Bacteria | Bacteria | 41.6 | 0.0087 | NR | GAA6889013.1 | 210 | g106870 | i0 | 76.9 | 0.423913043478261 | 26 | 6 | 42.4 | 0 | 107 | 184 | 1 | 26 | GAA6889013.1 hypothetical protein Kyoto206A_5310 [Helicobacter pylori] | diamond | 78 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32118761 | 32118761 | PRJNA976345_P_NODE_22058_length_358_cov_4.866873_g20458_i0 | PRJNA976345 | 22058 | 358 | 4.866873 | 17.42340534 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 109 | 4.59e-25 | NR | MCB4773443.1 | 1969726 | g20458 | i0 | 42.7 | 1.9608938547486 | 117 | 66 | 98 | 1 | 8 | 358 | 92 | 207 | MCB4773443.1 reverse transcriptase family protein [Sulfurovum sp.] | diamond | 702 | 109 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum sp. | ||
| 32593266 | 32593266 | PRJNA976345_P_NODE_168679_length_159_cov_1.919355_g167071_i0 | PRJNA976345 | 168679 | 159 | 1.919355 | 3.05177445 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 100 | 9.96e-26 | NR | MCH3765066.1 | 195 | g167071 | i0 | 94.2 | 3.88679245283019 | 52 | 3 | 98.1 | 0 | 158 | 3 | 46 | 97 | MCH3765066.1 hypothetical protein [Campylobacter coli] | diamond | 618 | 100 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;