RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA976345", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 5 ✖

tax_phylum 1

  • Armatimonadota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA976345 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11470922 11470922 PRJNA976345_P_NODE_167469_length_160_cov_0.936000_g165861_i0 PRJNA976345 167469 160 0.936 1.4976 Armatimonadota 67819 Bacteria Bacteria 124 2.77e-24   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g165861 i0 81.366 160.13125 161 23 98 7 5 160 37309 37151 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 25621 124 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
26652127 26652127 PRJNA976345_P_NODE_152341_length_165_cov_2.076923_g150733_i0 PRJNA976345 152341 165 2.076923 3.42692295 Bacteria 2 Bacteria Bacteria 77.8 3.69e-15   NR MFN3649231.1 2033014 g150733 i0 72.7 4 55 15 100 0 1 165 231 285 MFN3649231.1 IS110 family transposase [Armatimonadota bacterium] diamond 660 78.2 0.994884910485933 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30942481 30942481 PRJNA976345_P_NODE_28634_length_315_cov_2.767857_g27030_i0 PRJNA976345 28634 315 2.767857 8.71874955 Armatimonadia bacterium 2663015 Bacteria Bacteria 133 1.34e-33   NR MEN6644137.1 2663015 g27030 i0 62.5 2.97142857142857 104 39 99 0 3 314 365 468 MEN6644137.1 hypothetical protein [Armatimonadia bacterium] diamond 936 133 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
31764419 31764419 PRJNA976345_P_NODE_64037_length_224_cov_1.513228_g62429_i0 PRJNA976345 64037 224 1.513228 3.38963072 Armatimonadota bacterium 2033014 Bacteria Bacteria 119 2.3099999999999997e-31   NR MES2460566.1 2033014 g62429 i0 92.5 0.897321428571429 67 5 89.7 0 24 224 1 67 MES2460566.1 PDZ domain-containing protein [Armatimonadota bacterium] diamond 201 119 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31985755 31985755 PRJNA976345_P_NODE_3398_length_1122_cov_2.089236_g2366_i0 PRJNA976345 3398 1122 2.089236 23.44122792 Armatimonadia bacterium 2663015 Bacteria Bacteria 299 7.57e-97   NR MEN6544468.1 2663015 g2366 i0 62.6 0.585561497326203 219 82 58.6 0 8 664 31 249 MEN6544468.1 NUDIX hydrolase [Armatimonadia bacterium] diamond 657 299 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;