RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA976345", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

analysis 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA976345 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16251699 16251699 PRJNA976345_P_NODE_76793_length_209_cov_1.747126_g75185_i0 PRJNA976345 76793 209 1.747126 3.65149334 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.005   NTclustered gi|2806472413|ref|XM_068508570.1| 1144522 g75185 i0 96.875 0.15311004784689 32 1 15 0 155 186 308 277 Tritrichomonas foetus uncharacterized protein (TRFO_32574), partial mRNA blastn 32 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27626485 27626485 PRJNA976345_P_NODE_178904_length_156_cov_1.314050_g177296_i0 PRJNA976345 178904 156 1.31405 2.049918 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 60.1 8.81e-9   NR GKT34476.1 2918883 g177296 i0 52 15.9615384615385 50 23 96.2 1 1 150 22 70 GKT34476.1 putative multi-domain containing protein [Aduncisulcus paluster] diamond 2490 60.1 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
30405593 30405593 PRJNA976345_P_NODE_152153_length_165_cov_2.253846_g150545_i0 PRJNA976345 152153 165 2.253846 3.7188459 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 50.8 1.7e-5   NR KAG9392810.1 201153 g150545 i0 48 0.909090909090909 50 26 90.9 0 2 151 259 308 KAG9392810.1 Ureohydrolase [Carpediemonas membranifera] diamond 150 50.8 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;