RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA976345", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA976345 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28510433 28510433 PRJNA976345_P_NODE_178667_length_156_cov_1.396694_g177059_i0 PRJNA976345 178667 156 1.396694 2.17884264 Minisyncoccota bacterium 2053589 Bacteria Bacteria 101 2.29e-25   NR MDD4804476.1 2053589 g177059 i0 98 0.942307692307692 49 1 94.2 0 148 2 130 178 MDD4804476.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 147 101 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30689448 30689448 PRJNA976345_P_NODE_58633_length_232_cov_1.005076_g57025_i0 PRJNA976345 58633 232 1.005076 2.33177632 Minisyncoccota bacterium 2053589 Bacteria Bacteria 134 1.23e-38   NR MDD4804356.1 2053589 g57025 i0 100 0.866379310344828 67 0 86.6 0 1 201 46 112 MDD4804356.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 201 134 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;