contig_metadata
18 rows where bioproject = "PRJNA975724", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4774187 | 4774187 | PRJNA975724_S_NODE_30624_length_346_cov_1.692308_g30443_i0 | PRJNA975724 | 30624 | 346 | 1.692308 | 5.85538568 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 88.6 | 3.33e-18 | NR | MEM9293740.1 | 1978231 | g30443 | i0 | 41.4 | 0.858381502890173 | 99 | 56 | 85.8 | 1 | 2 | 298 | 214 | 310 | MEM9293740.1 serine protease [Acidobacteriota bacterium] | diamond | 297 | 88.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 9873684 | 9873684 | PRJNA975724_S_NODE_1668_length_697_cov_2.687500_g1508_i0 | PRJNA975724 | 1668 | 697 | 2.6875 | 18.731875 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 780 | 0 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g1508 | i0 | 87.776 | 340.200860832138 | 679 | 68 | 96 | 14 | 1 | 672 | 317922 | 317252 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 237120 | 780 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 15294710 | 15294710 | PRJNA975724_S_NODE_15952_length_407_cov_3.401198_g15771_i0 | PRJNA975724 | 15952 | 407 | 3.401198 | 13.84287586 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 132 | 1.46e-36 | NR | MBI4750349.1 | 1978231 | g15771 | i0 | 64.2 | 2.04176904176904 | 95 | 34 | 70 | 0 | 391 | 107 | 46 | 140 | MBI4750349.1 RidA family protein [Acidobacteriota bacterium] | diamond | 831 | 132 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 15294729 | 15294729 | PRJNA975724_S_NODE_28132_length_354_cov_2.807829_g27951_i0 | PRJNA975724 | 28132 | 354 | 2.807829 | 9.93971466 | Bacteria | 2 | Bacteria | Bacteria | 122 | 3.77e-33 | NR | OFV82256.1 | 1797171 | g27951 | i0 | 54.9 | 5.1271186440678 | 102 | 45 | 86.4 | 1 | 330 | 25 | 33 | 133 | OFV82256.1 MAG: CoA-binding protein [Acidobacteria bacterium RBG_13_68_16] | diamond | 1815 | 122 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteria bacterium RBG_13_68_16 | ||||||
| 18798751 | 18798751 | PRJNA975724_S_NODE_7135_length_483_cov_13.078049_g6954_i0 | PRJNA975724 | 7135 | 483 | 13.078049 | 63.16697667 | Geothrix sp. | 1962974 | Bacteria | Bacteria | 56.5 | 0.004 | NTclustered | gi|2515262989|gb|CP126625.1| | 1962974 | g6954 | i0 | 100 | 0.12008281573499 | 30 | 0 | 6 | 0 | 284 | 313 | 1874545 | 1874516 | MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome | blastn | 58 | 56.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 21348118 | 21348118 | PRJNA975724_S_NODE_377_length_1070_cov_2.296891_g321_i0 | PRJNA975724 | 377 | 1070 | 2.296891 | 24.5767337 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 1496 | 0 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g321 | i0 | 91.922 | 173.084112149533 | 1077 | 75 | 100 | 11 | 1 | 1070 | 3300090 | 3299019 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 185200 | 1496 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27310704 | 27310704 | PRJNA975724_S_NODE_29183_length_350_cov_10.079422_g29002_i0 | PRJNA975724 | 29183 | 350 | 10.079422 | 35.277977 | Terracidiphilus sp. | 1964191 | Bacteria | Bacteria | 44.3 | 0.0338 | NR | MDR3739218.1 | 1964191 | g29002 | i0 | 38.8 | 0.685714285714286 | 80 | 46 | 66.9 | 2 | 88 | 321 | 112 | 190 | MDR3739218.1 glycosyltransferase family 39 protein [Terracidiphilus sp.] | diamond | 240 | 44.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terracidiphilus | Terracidiphilus sp. | ||
| 27500096 | 27500096 | PRJNA975724_S_NODE_19143_length_390_cov_6.031546_g18962_i0 | PRJNA975724 | 19143 | 390 | 6.031546 | 23.5230294 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 72.4 | 7.89e-12 | NR | HSY98728.1 | 2282142 | g18962 | i0 | 44.3 | 2.33846153846154 | 79 | 40 | 60 | 2 | 2 | 235 | 604 | 679 | HSY98728.1 M13 family metallopeptidase [Terriglobales bacterium] | diamond | 912 | 72.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 29646611 | 29646611 | PRJNA975724_S_NODE_72150_length_259_cov_2.897849_g71969_i0 | PRJNA975724 | 72150 | 259 | 2.897849 | 7.50542891 | Holophagales bacterium | 2478486 | Bacteria | Bacteria | 77 | 3.93e-14 | NR | MBK9090875.1 | 2478486 | g71969 | i0 | 52.1 | 5.07335907335907 | 73 | 34 | 84.6 | 1 | 253 | 35 | 664 | 735 | MBK9090875.1 penicillin acylase family protein [Holophagales bacterium] | diamond | 1314 | 77 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagales bacterium | ||||
| 29709801 | 29709801 | PRJNA975724_S_NODE_22350_length_376_cov_1.452145_g22169_i0 | PRJNA975724 | 22350 | 376 | 1.452145 | 5.4600652 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 137 | 1.4e-36 | NR | MEM7050594.1 | 1978231 | g22169 | i0 | 63.5 | 0.829787234042553 | 104 | 38 | 83 | 0 | 2 | 313 | 231 | 334 | MEM7050594.1 NADP-dependent oxidoreductase [Acidobacteriota bacterium] | diamond | 312 | 137 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30190126 | 30190126 | PRJNA975724_S_NODE_30912_length_345_cov_1.698529_g30731_i0 | PRJNA975724 | 30912 | 345 | 1.698529 | 5.85992505 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 129 | 7.579999999999998e-32 | NR | HMV85460.1 | 2052146 | g30731 | i0 | 72.2 | 20.4260869565217 | 79 | 22 | 68.7 | 0 | 336 | 100 | 1942 | 2020 | HMV85460.1 alpha-2-macroglobulin family protein [Blastocatellia bacterium] | diamond | 7047 | 129 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 30279144 | 30279144 | PRJNA975724_S_NODE_90992_length_241_cov_1.375000_g90811_i0 | PRJNA975724 | 90992 | 241 | 1.375 | 3.31375 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 149 | 4.8099999999999985e-43 | NR | HEY0460243.1 | 2283092 | g90811 | i0 | 93.8 | 6.95850622406639 | 80 | 5 | 99.6 | 0 | 2 | 241 | 138 | 217 | HEY0460243.1 RNA polymerase sigma factor [Pyrinomonadaceae bacterium] | diamond | 1677 | 149 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 30689386 | 30689386 | PRJNA975724_S_NODE_52833_length_292_cov_1.054795_g52652_i0 | PRJNA975724 | 52833 | 292 | 1.054795 | 3.0800014 | Edaphobacter modestus | 388466 | Bacteria | Bacteria | 71.6 | 4.62e-12 | NR | WP_165420076.1 | 388466 | g52652 | i0 | 47.9 | 0.986301369863014 | 96 | 48 | 98.6 | 2 | 3 | 290 | 157 | 250 | WP_165420076.1 beta strand repeat-containing protein [Edaphobacter modestus] | diamond | 288 | 71.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Edaphobacter | Edaphobacter modestus | ||
| 30695705 | 30695705 | PRJNA975724_S_NODE_25113_length_365_cov_2.770548_g24932_i0 | PRJNA975724 | 25113 | 365 | 2.770548 | 10.1125002 | Bacteria | 2 | Bacteria | Bacteria | 101 | 1.76e-22 | NR | HTB16640.1 | 2212468 | g24932 | i0 | 77 | 10.5534246575342 | 61 | 14 | 50.1 | 0 | 2 | 184 | 338 | 398 | HTB16640.1 acyl-CoA dehydrogenase family protein [Bryobacteraceae bacterium] | diamond | 3852 | 101 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 31384954 | 31384954 | PRJNA975724_S_NODE_38996_length_322_cov_1.855422_g38815_i0 | PRJNA975724 | 38996 | 322 | 1.855422 | 5.97445884 | Candidatus Acidiferrales bacterium | 2952895 | Bacteria | Bacteria | 50.4 | 1.83e-4 | NR | MEE8199672.1 | 2952895 | g38815 | i0 | 70.6 | 0.316770186335404 | 34 | 10 | 31.7 | 0 | 283 | 182 | 575 | 608 | MEE8199672.1 protein kinase [Candidatus Acidiferrales bacterium] | diamond | 102 | 50.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrales bacterium | ||||
| 31384959 | 31384959 | PRJNA975724_S_NODE_57656_length_283_cov_1.100000_g57475_i0 | PRJNA975724 | 57656 | 283 | 1.1 | 3.113 | Candidatus Polarisedimenticolaceae bacterium | 2910585 | Bacteria | Bacteria | 55.5 | 1.96e-6 | NR | HEX6849897.1 | 2910585 | g57475 | i0 | 71.4 | 0.742049469964664 | 35 | 10 | 37.1 | 0 | 282 | 178 | 399 | 433 | HEX6849897.1 citrate (Si)-synthase, eukaryotic [Candidatus Polarisedimenticolaceae bacterium] | diamond | 210 | 55.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Candidatus Polarisedimenticolia | Candidatus Polarisedimenticolales | Candidatus Polarisedimenticolaceae | Candidatus Polarisedimenticolaceae bacterium | |||
| 32150337 | 32150337 | PRJNA975724_S_NODE_52818_length_292_cov_1.054795_g52637_i0 | PRJNA975724 | 52818 | 292 | 1.054795 | 3.0800014 | Bacteria | 2 | Bacteria | Bacteria | 81.3 | 6.49e-16 | NR | MBX3290175.1 | 1978231 | g52637 | i0 | 57.1 | 2.58904109589041 | 63 | 26 | 64.7 | 1 | 272 | 84 | 233 | 294 | MBX3290175.1 glycerophosphodiester phosphodiesterase [Acidobacteriota bacterium] | diamond | 756 | 81.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32618348 | 32618348 | PRJNA975724_S_NODE_40040_length_319_cov_4.382114_g39859_i0 | PRJNA975724 | 40040 | 319 | 4.382114 | 13.97894366 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 70.5 | 1.59e-11 | NR | MSO56058.1 | 1978231 | g39859 | i0 | 56.7 | 6.13166144200627 | 60 | 26 | 56.4 | 0 | 3 | 182 | 542 | 601 | MSO56058.1 translational GTPase TypA [Acidobacteriota bacterium] | diamond | 1956 | 70.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;