RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA975724" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA975724 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
946609 946609 PRJNA975724_S_NODE_581_length_944_cov_8.104478_g483_i0 PRJNA975724 581 944 8.104478 76.50627232 Moloney murine leukemia virus 11801 Viruses Viruses 537 1.1299999999999998e-174   NR NP_057933.2 11801 g483 i0 97.5 0.883474576271186 278 7 88.3 0 2 835 1058 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 834 537 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31922525 31922525 PRJNA975724_S_NODE_517_length_979_cov_7.325607_g426_i0 PRJNA975724 517 979 7.325607 71.71769253 Gammaretrovirus murleu 3428959 Viruses Viruses 650 1.1299999999999996e-232   NR 8WUS_E 11801 g426 i0 99.1 7.82022471910112 319 3 97.8 0 977 21 28 346 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 7656 650 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;