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contig_metadata

8 rows where bioproject = "PRJNA975724" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

bioproject 1

  • PRJNA975724 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
945647 945647 PRJNA975724_S_NODE_2181_length_647_cov_6.168990_g2011_i0 PRJNA975724 2181 647 6.16899 39.9133653 root 1 Root_unresolved Root_unresolved 226 7.2099999999999995e-68   NR MBX7076496.1 2099680 g2011 i0 60.3 6.12982998454405 199 79 92.3 0 2 598 292 490 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 3966 226 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
6049113 6049113 PRJNA975724_S_NODE_33085_length_338_cov_2.883019_g32904_i0 PRJNA975724 33085 338 2.883019 9.74460422 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 144 2.68e-41   NR HJN55548.1 2163009 g32904 i0 71.7 1.64201183431953 92 26 81.7 0 338 63 94 185 HJN55548.1 peptidylprolyl isomerase [Candidatus Poseidoniales archaeon] diamond 555 144 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
23898907 23898907 PRJNA975724_S_NODE_52539_length_292_cov_2.109589_g52358_i0 PRJNA975724 52539 292 2.109589 6.15999988 Halogeometricum borinquense 60847 Archaea Archaea 56.5 0.002   NTclustered gi|1810666233|gb|CP048739.1| 60847 g52358 i0 96.97 0.113013698630137 33 1 11 0 58 90 3003417 3003385 Halogeometricum borinquense strain wsp4 chromosome, complete genome blastn 33 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense
27278956 27278956 PRJNA975724_S_NODE_19203_length_390_cov_2.835962_g19022_i0 PRJNA975724 19203 390 2.835962 11.0602518 Thermococci archaeon 2250254 Archaea Archaea 68.9 1.66e-11   NR NPA48192.1 2250254 g19022 i0 47.5 0.469230769230769 61 32 46.9 0 2 184 119 179 NPA48192.1 nicotinamidase [Thermococci archaeon] diamond 183 68.9 1 Archaea   Methanobacteriati Methanobacteriota Thermococci       Thermococci archaeon
28200644 28200644 PRJNA975724_S_NODE_42226_length_314_cov_2.755187_g42045_i0 PRJNA975724 42226 314 2.755187 8.65128718 Archaea 2157 Archaea Archaea 55.1 3.85e-6   NR MCK5253134.1 1906666 g42045 i0 54.9 1.43312101910828 51 19 47.8 2 5 154 445 492 MCK5253134.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Thermoplasmata archaeon] diamond 450 55.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28769111 28769111 PRJNA975724_S_NODE_35147_length_332_cov_2.420849_g34966_i0 PRJNA975724 35147 332 2.420849 8.03721868 Archaea 2157 Archaea Archaea 69.7 2.73e-11   NR GIQ98002.1 2163009 g34966 i0 39.8 4.50903614457831 83 48 75 1 6 254 266 346 GIQ98002.1 MAG: diacylglycerol kinase [Candidatus Poseidoniales archaeon] diamond 1497 69.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32017412 32017412 PRJNA975724_S_NODE_1458_length_724_cov_14.678955_g1306_i0 PRJNA975724 1458 724 14.678955 106.2756342 Thermoplasmatota archaeon 2806419 Archaea Archaea 72.8 1.47e-10   NR MEC7255192.1 2806419 g1306 i0 32.7 0.948895027624309 110 73 45.6 1 1 330 878 986 MEC7255192.1 putative Ig domain-containing protein [Thermoplasmatota archaeon] diamond 687 72.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32175869 32175869 PRJNA975724_S_NODE_28618_length_352_cov_4.989247_g28437_i0 PRJNA975724 28618 352 4.989247 17.56214944 Thermoplasmata archaeon 1906666 Archaea Archaea 48.9 8.31e-4   NR MDO9537579.1 1906666 g28437 i0 53.2 0.400568181818182 47 22 40.1 0 352 212 376 422 MDO9537579.1 hydroxymethylglutaryl-CoA reductase, degradative [Thermoplasmata archaeon] diamond 141 48.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;