RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA975724", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA975724 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30626150 30626150 PRJNA975724_S_NODE_27653_length_356_cov_1.395760_g27472_i0 PRJNA975724 27653 356 1.39576 4.9689056 Olpidium bornovanus 278681 Fungi Fungi 100 3.74e-22   NR KAG5459198.1 278681 g27472 i0 51 0.859550561797753 102 49 86 1 353 48 374 474 KAG5459198.1 MAG: P-loop containing nucleoside triphosphate hydrolase protein [Olpidium bornovanus] diamond 306 100 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31859119 31859119 PRJNA975724_S_NODE_49117_length_299_cov_1.482301_g48936_i0 PRJNA975724 49117 299 1.482301 4.43207999 Olpidium bornovanus 278681 Fungi Fungi 59.3 1.21e-8   NR KAG5456836.1 278681 g48936 i0 61.7 0.471571906354515 47 17 46.2 1 2 139 84 130 KAG5456836.1 MAG: hypothetical protein BJ554DRAFT_3309 [Olpidium bornovanus] diamond 141 59.3 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;