RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA975724", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA975724 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10195406 10195406 PRJNA975724_S_NODE_188_length_1364_cov_5.061967_g164_i0 PRJNA975724 188 1364 5.061967 69.04522988 Fimbriimonas 1005038 Bacteria Bacteria 1866 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g164 i0 91.593 193.206744868035 1356 106 99 6 14 1363 29105 27752 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 263534 1866 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
32750566 32750566 PRJNA975724_S_NODE_24560_length_367_cov_3.071429_g24379_i0 PRJNA975724 24560 367 3.071429 11.27214443 root 1 Root_unresolved Root_unresolved 46.2 0.00219   NR HID06913.1 2033014 g24379 i0 61.5 2.08446866485014 39 15 31.9 0 328 212 73 111 HID06913.1 30S ribosomal protein S13 [Armatimonadota bacterium] diamond 765 46.6 0.991416309012876 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;