RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA975724", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA975724 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29520694 29520694 PRJNA975724_S_NODE_31790_length_342_cov_2.167286_g31609_i0 PRJNA975724 31790 342 2.167286 7.41211812 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 47.4 0.00282   NR MBC8382888.1 2030808 g31609 i0 58.5 0.359649122807018 41 16 36 1 1 123 229 268 MBC8382888.1 aldehyde dehydrogenase family protein [Candidatus Cloacimonadota bacterium] diamond 123 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31479958 31479958 PRJNA975724_S_NODE_82896_length_247_cov_2.212644_g82715_i0 PRJNA975724 82896 247 2.212644 5.46523068 Candidatus Cloacimonadaceae bacterium 3064664 Bacteria Bacteria 65.5 1.21e-10   NR MDZ4182100.1 3064664 g82715 i0 51.7 0.704453441295547 58 28 70.4 0 16 189 158 215 MDZ4182100.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Candidatus Cloacimonadaceae bacterium] diamond 174 65.5 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae   Candidatus Cloacimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;