RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA975724", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA975724 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26868007 26868007 PRJNA975724_S_NODE_46341_length_305_cov_1.327586_g46160_i0 PRJNA975724 46341 305 1.327586 4.0491373 Balneolaceae bacterium 2053516 Bacteria Bacteria 58.2 2.97e-7   NR HMB99235.1 2053516 g46160 i0 55.8 0.422950819672131 43 17 42.3 1 19 147 686 726 HMB99235.1 S9 family peptidase [Balneolaceae bacterium] diamond 129 58.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
31289800 31289800 PRJNA975724_S_NODE_49955_length_297_cov_2.062500_g49774_i0 PRJNA975724 49955 297 2.0625 6.125625 Balneolaceae bacterium 2053516 Bacteria Bacteria 69.3 2.21e-11   NR MEX0660328.1 2053516 g49774 i0 47.3 0.747474747474748 74 39 74.7 0 262 41 247 320 MEX0660328.1 M20/M25/M40 family metallo-hydrolase [Balneolaceae bacterium] diamond 222 69.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;