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contig_metadata

12 rows where bioproject = "PRJNA975724", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 12 ✖

tax_clade 1

  • Bacteria candidate phyla · 12 ✖

bioproject 1

  • PRJNA975724 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3496127 3496127 PRJNA975724_S_NODE_15903_length_407_cov_9.380240_g15722_i0 PRJNA975724 15903 407 9.38024 38.1775768 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 107 1.08e-27   NR MBN1857846.1 2306012 g15722 i0 74.2 0.486486486486487 66 17 48.6 0 87 284 4 69 MBN1857846.1 cold-shock protein [Candidatus Bipolaricaulota bacterium] diamond 198 107 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
4773927 4773927 PRJNA975724_S_NODE_20644_length_383_cov_8.154839_g20463_i0 PRJNA975724 20644 383 8.154839 31.23303337 Parcubacteria group bacterium CG 2026774 Bacteria Bacteria 149 1.01e-40   NR PIS34603.1 2014323 g20463 i0 67.7 10.2062663185379 99 32 77.5 0 5 301 300 398 PIS34603.1 MAG: elongation factor Tu [Parcubacteria group bacterium CG08_land_8_20_14_0_20_43_9] diamond 3909 149 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium CG08_land_8_20_14_0_20_43_9
27057629 27057629 PRJNA975724_S_NODE_6182_length_499_cov_2.009390_g6003_i0 PRJNA975724 6182 499 2.00939 10.0268561 Patescibacteria group bacterium 2052139 Bacteria Bacteria 75.1 2.33e-13   NR MEK7187714.1 2052139 g6003 i0 43 0.517034068136273 86 49 51.7 0 484 227 90 175 MEK7187714.1 NUDIX domain-containing protein [Patescibacteria group bacterium] diamond 258 75.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27594846 27594846 PRJNA975724_S_NODE_84904_length_246_cov_0.890173_g84723_i0 PRJNA975724 84904 246 0.890173 2.18982558 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 55.5 6.35e-7   NR MCX7017712.1 2107588 g84723 i0 40.7 1.81707317073171 59 35 72 0 29 205 61 119 MCX7017712.1 YbjN domain-containing protein [Candidatus Sumerlaeota bacterium] diamond 447 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
27658073 27658073 PRJNA975724_S_NODE_90664_length_241_cov_2.059524_g90483_i0 PRJNA975724 90664 241 2.059524 4.96345284 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 91.7 2.23e-19   NR PLX28907.1 2762014 g90483 i0 70.6 1.70539419087137 68 16 84.6 2 5 208 698 761 PLX28907.1 MAG: hypothetical protein C0581_00580 [Candidatus Parcubacteria bacterium] diamond 411 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30594592 30594592 PRJNA975724_S_NODE_68973_length_264_cov_1.528796_g68792_i0 PRJNA975724 68973 264 1.528796 4.03602144 Minisyncoccota bacterium 2053589 Bacteria Bacteria 61.2 1.43e-8   NR MDR3548550.1 2053589 g68792 i0 40 1.88636363636364 85 50 96.6 1 3 257 277 360 MDR3548550.1 reverse transcriptase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 498 61.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30695708 30695708 PRJNA975724_S_NODE_88733_length_243_cov_0.905882_g88552_i0 PRJNA975724 88733 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 48.1 1.87e-4   NR OGH21289.1 1798598 g88552 i0 50 4.85185185185185 52 24 61.7 1 30 179 93 144 OGH21289.1 MAG: 30S ribosomal protein S7 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_41_15] diamond 1179 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_41_15
30720992 30720992 PRJNA975724_S_NODE_12754_length_428_cov_1.729577_g12573_i0 PRJNA975724 12754 428 1.729577 7.40258956 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 136 2.8199999999999997e-37   NR MBR2726012.1 2026720 g12573 i0 61.2 0.72196261682243 103 39 71.5 1 1 306 113 215 MBR2726012.1 uracil-DNA glycosylase [Candidatus Saccharibacteria bacterium] diamond 309 136 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31701113 31701113 PRJNA975724_S_NODE_30457_length_346_cov_7.630037_g30276_i0 PRJNA975724 30457 346 7.630037 26.39992802 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 45.8 0.0088   NR MEX0939744.1 2803731 g30276 i0 44 0.433526011560694 50 28 43.4 0 4 153 265 314 MEX0939744.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Babeliales bacterium] diamond 150 45.8 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
32681081 32681081 PRJNA975724_S_NODE_25280_length_364_cov_5.178694_g25099_i0 PRJNA975724 25280 364 5.178694 18.85044616 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 130 3.4e-33   NR MCL2451447.1 2026720 g25099 i0 59 0.865384615384615 105 43 86.5 0 364 50 314 418 MCL2451447.1 asparagine synthase-related protein [Candidatus Saccharibacteria bacterium] diamond 315 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32681082 32681082 PRJNA975724_S_NODE_3560_length_567_cov_1.787449_g3383_i0 PRJNA975724 3560 567 1.787449 10.13483583 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 147 2.34e-39   NR MBP6875432.1 2212470 g3383 i0 66.4 2.35978835978836 110 34 58.2 1 567 238 61 167 MBP6875432.1 hypothetical protein [Candidatus Eiseniibacteriota bacterium] diamond 1338 147 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
32807277 32807277 PRJNA975724_S_NODE_93960_length_227_cov_2.097403_g93779_i0 PRJNA975724 93960 227 2.097403 4.76110481 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42 0.0313   NR MYE91290.1 2026781 g93779 i0 59.4 0.422907488986784 32 11 42.3 1 3 98 121 150 MYE91290.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 96 42 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;