RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA971676" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA971676 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27190163 27190163 PRJNA971676_P_NODE_22642_length_242_cov_0.911243_g22553_i0 PRJNA971676 22642 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 159 8.579999999999999e-48   NR MCK4453393.1 2052148 g22553 i0 98.8 1.98347107438017 80 1 99.2 0 242 3 68 147 MCK4453393.1 glycosyltransferase family 2 protein [candidate division WOR-3 bacterium] diamond 480 159 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
27247217 27247217 PRJNA971676_P_NODE_23103_length_241_cov_0.916667_g23014_i0 PRJNA971676 23103 241 0.916667 2.20916747 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 79 1.73e-17   NR MCK4526241.1 2052148 g23014 i0 86.8 0.473029045643154 38 5 47.3 0 124 237 10 47 MCK4526241.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 114 79 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
27468513 27468513 PRJNA971676_P_NODE_19123_length_246_cov_0.890173_g19034_i0 PRJNA971676 19123 246 0.890173 2.18982558 candidate division WOR-3 bacterium JGI_Cruoil_ 2052148 Bacteria Bacteria 144 1.16e-39   NR OYD14878.1 1973748 g19034 i0 80.5 2 82 16 100 0 1 246 74 155 OYD14878.1 MAG: aspartate aminotransferase [candidate division WOR-3 bacterium JGI_Cruoil_03_44_89] diamond 492 144 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium JGI_Cruoil_03_44_89
29868068 29868068 PRJNA971676_P_NODE_15411_length_250_cov_0.870056_g15322_i0 PRJNA971676 15411 250 0.870056 2.17514 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 105 4.5e-24   NR MCK4396315.1 2052148 g15322 i0 60.7 1.068 89 28 98.4 2 3 248 511 599 MCK4396315.1 carboxypeptidase regulatory-like domain-containing protein [candidate division WOR-3 bacterium] diamond 267 105 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
30183937 30183937 PRJNA971676_P_NODE_15252_length_250_cov_0.870056_g15163_i0 PRJNA971676 15252 250 0.870056 2.17514 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 127 2.49e-36   NR MCK4526269.1 2052148 g15163 i0 78.5 0.948 79 16 94.8 1 239 3 1 78 MCK4526269.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 237 127 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
30942417 30942417 PRJNA971676_P_NODE_23274_length_241_cov_0.916667_g23185_i0 PRJNA971676 23274 241 0.916667 2.20916747 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 115 9.77e-29   NR MCK4574803.1 2052148 g23185 i0 98.3 0.734439834024896 59 1 73.4 0 178 2 1 59 MCK4574803.1 tetratricopeptide repeat protein [candidate division WOR-3 bacterium] diamond 177 115 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31511489 31511489 PRJNA971676_P_NODE_14876_length_250_cov_0.870056_g14787_i0 PRJNA971676 14876 250 0.870056 2.17514 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 97.1 7.53e-22   NR MCK4421441.1 2052148 g14787 i0 98 0.588 49 1 58.8 0 103 249 232 280 MCK4421441.1 type I glyceraldehyde-3-phosphate dehydrogenase [candidate division WOR-3 bacterium] diamond 147 97.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31606217 31606217 PRJNA971676_P_NODE_15876_length_249_cov_0.875000_g15787_i0 PRJNA971676 15876 249 0.875 2.17875 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 124 4.25e-34   NR MCK4529084.1 2052148 g15787 i0 71.6 0.975903614457831 81 23 97.6 0 244 2 40 120 MCK4529084.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 243 124 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;