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contig_metadata

34 rows where bioproject = "PRJNA971676" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 34 ✖

tax_clade 1

bioproject 1

  • PRJNA971676 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1266295 1266295 PRJNA971676_P_NODE_10961_length_277_cov_1.132353_g10872_i0 PRJNA971676 10961 277 1.132353 3.13661781 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 379 1.03e-100   NTclustered gi|74829873|emb|CR932119.1| 5888 g10872 i0 91.336 97.0397111913357 277 24 100 0 1 277 5195 4919 Paramecium tetraurelia macronuclear, alpha-tubulin-related protein gene blastn 26880 379 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
2220129 2220129 PRJNA971676_P_NODE_5782_length_350_cov_1.667870_g5693_i0 PRJNA971676 5782 350 1.66787 5.837545 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 460 4.64e-125   NTclustered gi|5701724|dbj|AB024694.1| 5908 g5693 i0 90.251 2.40857142857143 359 25 99 6 1 349 360 2 Tetrahymena pyriformis mRNA for 14-3-3 protein, complete cds blastn 843 460 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
7644422 7644422 PRJNA971676_P_NODE_14826_length_250_cov_0.870056_g14737_i0 PRJNA971676 14826 250 0.870056 2.17514 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 329 9.34e-86   NTclustered gi|10812|emb|X05543.1| 5911 g14737 i0 91.02 5.848 245 20 98 2 6 249 304 547 Tetrahymena thermophila gene for histone H2B-1 from macronucleus blastn 1462 329 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8597480 8597480 PRJNA971676_P_NODE_13267_length_255_cov_2.010989_g13178_i0 PRJNA971676 13267 255 2.010989 5.12802195 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 333 7.3899999999999995e-87   NTclustered gi|829157134|ref|XM_001011598.2| 312017 g13178 i0 90.196 1 255 25 100 0 1 255 590 844 Tetrahymena thermophila SB210 60S ribosomal protein L5 partial mRNA blastn 255 333 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8919415 8919415 PRJNA971676_P_NODE_7367_length_322_cov_1.236948_g7278_i0 PRJNA971676 7367 322 1.236948 3.98297256 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 512 1.1499999999999998e-140   NTclustered gi|10935|emb|X56693.1| 5908 g7278 i0 95.342 145.130434782609 322 15 100 0 1 322 645 324 Tetrahymena pyriformis TUF11 gene for ubiquitin-ribosomal protein fusion protein blastn 46732 516 0.992248062015504 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
8919442 8919442 PRJNA971676_P_NODE_9467_length_292_cov_1.141553_g9378_i0 PRJNA971676 9467 292 1.141553 3.33333476 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 390 5.049999999999999e-104   NTclustered gi|161789|gb|M87504.1|TETHIS32A 5911 g9378 i0 93.511 35.8801369863014 262 17 90 0 4 265 471 210 Tetrahymena thermophila histone H3 (HHT2) gene, complete cds blastn 10477 390 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
20071151 20071151 PRJNA971676_P_NODE_10536_length_281_cov_1.764423_g10447_i0 PRJNA971676 10536 281 1.764423 4.95802863 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 342 1.3699999999999997e-89   NTclustered gi|829164475|ref|XM_971965.3| 312017 g10447 i0 88.849 1.62277580071174 278 31 99 0 4 281 1049 772 Tetrahymena thermophila SB210 protein transporter Sec61 alpha subunit partial mRNA blastn 456 342 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
26645864 26645864 PRJNA971676_P_NODE_14301_length_251_cov_0.865169_g14212_i0 PRJNA971676 14301 251 0.865169 2.17157419 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 141 6.01e-41   NR XP_001445732.1 5888 g14212 i0 80.8 9.32270916334661 78 15 93.2 0 234 1 1 78 XP_001445732.1 uncharacterized protein GSPATT00013765001 [Paramecium tetraurelia] diamond 2340 141 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
26683921 26683921 PRJNA971676_P_NODE_21321_length_243_cov_0.905882_g21232_i0 PRJNA971676 21321 243 0.905882 2.20129326 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 79.3 1.69e-15   NR XP_004027334.1 5932 g21232 i0 44.4 2 81 44 100 1 1 243 32 111 XP_004027334.1 hypothetical protein IMG5_185720 [Ichthyophthirius multifiliis] diamond 486 79.7 0.994981179422836 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
26709091 26709091 PRJNA971676_P_NODE_3101_length_446_cov_1.238606_g3012_i0 PRJNA971676 3101 446 1.238606 5.52418276 Tetrahymena malaccensis 5901 SAR_Eukaryotes SAR_Eukaryotes 120 2.25e-29   NR KAL4480407.1 5901 g3012 i0 77.9 1.02242152466368 77 17 51.8 0 435 205 9 85 KAL4480407.1 hypothetical protein ABPG74_020923 [Tetrahymena malaccensis] diamond 456 120 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
27215413 27215413 PRJNA971676_P_NODE_14182_length_251_cov_0.865169_g14093_i0 PRJNA971676 14182 251 0.865169 2.17157419 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 151 2.1399999999999996e-41   NR XP_001007359.2 312017 g14093 i0 86.6 0.9800796812749 82 11 98 0 1 246 85 166 XP_001007359.2 transmembrane protein, putative [Tetrahymena thermophila SB210] diamond 246 151 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
27468511 27468511 PRJNA971676_P_NODE_13003_length_258_cov_1.248649_g12914_i0 PRJNA971676 13003 258 1.248649 3.22151442 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00899   NR CDW86772.1 5949 g12914 i0 46.9 0.569767441860465 49 24 57 1 219 73 68 114 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 147 43.9 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27689799 27689799 PRJNA971676_P_NODE_10324_length_284_cov_0.748815_g10235_i0 PRJNA971676 10324 284 0.748815 2.1266346 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 73.2 1.11e-12   NR CDW77446.1 5949 g10235 i0 49.3 2.7887323943662 67 34 70.8 0 5 205 367 433 CDW77446.1 dual specificity protein phosphatase 1 [Stylonychia lemnae] diamond 792 73.2 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27721442 27721442 PRJNA971676_P_NODE_9664_length_289_cov_2.106481_g9575_i0 PRJNA971676 9664 289 2.106481 6.08773009 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 136 8.6e-39   NR XP_001015874.1 312017 g9575 i0 89.2 0.86159169550173 83 8 86.2 1 40 288 3 84 XP_001015874.1 40S ribosomal protein S15 [Tetrahymena thermophila SB210] diamond 249 136 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
27759140 27759140 PRJNA971676_P_NODE_11844_length_269_cov_1.209184_g11755_i0 PRJNA971676 11844 269 1.209184 3.25270496 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 108 2.6e-28   NR XP_004030095.1 5932 g11755 i0 60.5 2.87732342007435 86 33 95.9 1 3 260 6 90 XP_004030095.1 hypothetical protein IMG5_167680 [Ichthyophthirius multifiliis] diamond 774 108 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
27815901 27815901 PRJNA971676_P_NODE_19284_length_245_cov_0.895349_g19195_i0 PRJNA971676 19284 245 0.895349 2.19360505 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 101 7.09e-23   NR CAD8169332.1 43137 g19195 i0 71 0.844897959183673 69 20 84.5 0 209 3 599 667 CAD8169332.1 unnamed protein product [Paramecium octaurelia] diamond 207 101 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
28131598 28131598 PRJNA971676_P_NODE_13685_length_251_cov_1.640449_g13596_i0 PRJNA971676 13685 251 1.640449 4.11752699 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.1e-4   NR XP_001009502.2 312017 g13596 i0 92 0.298804780876494 25 2 29.9 0 167 93 934 958 XP_001009502.2 transmembrane protein, putative [Tetrahymena thermophila SB210] diamond 75 50.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28289126 28289126 PRJNA971676_P_NODE_15006_length_250_cov_0.870056_g14917_i0 PRJNA971676 15006 250 0.870056 2.17514 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 97.8 1.3400000000000002e-21   NR XP_001013804.3 312017 g14917 i0 85.9 1.536 64 9 76.8 0 192 1 1 64 XP_001013804.3 hypothetical protein TTHERM_00426260 [Tetrahymena thermophila SB210] diamond 384 97.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28422057 28422057 PRJNA971676_P_NODE_10026_length_286_cov_1.342723_g9937_i0 PRJNA971676 10026 286 1.3427230000000001 3.84018778 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 67 1.79e-10   NR KAL4445467.1 5901 g9937 i0 78.6 0.881118881118881 42 9 44.1 0 25 150 333 374 KAL4445467.1 hypothetical protein ABPG74_004541 [Tetrahymena malaccensis] diamond 252 67 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
28857524 28857524 PRJNA971676_P_NODE_7868_length_314_cov_0.958506_g7779_i0 PRJNA971676 7868 314 0.958506 3.00970884 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 92 9.11e-20   NR XP_001010758.2 312017 g7779 i0 71.9 0.611464968152866 64 17 60.2 1 243 55 246 309 XP_001010758.2 eukaryotic porin protein [Tetrahymena thermophila SB210] diamond 192 92 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28952614 28952614 PRJNA971676_P_NODE_12768_length_260_cov_1.331551_g12679_i0 PRJNA971676 12768 260 1.331551 3.4620326 Paramecium pentaurelia 43138 SAR_Eukaryotes SAR_Eukaryotes 82.8 1.01e-16   NR CAD8159065.1 43138 g12679 i0 68.9 2.11153846153846 61 19 70.4 0 1 183 59 119 CAD8159065.1 unnamed protein product [Paramecium pentaurelia] diamond 549 82.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
29085061 29085061 PRJNA971676_P_NODE_8028_length_311_cov_1.941176_g7939_i0 PRJNA971676 8028 311 1.941176 6.03705736 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 140 1.16e-39   NR 4V8P_CO 5911 g7939 i0 67.6 9.85852090032154 102 33 98.4 0 311 6 15 116 4V8P_CO Chain CO, RPL19 [Tetrahymena thermophila] diamond 3066 141 0.99290780141844 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29868073 29868073 PRJNA971676_P_NODE_18891_length_246_cov_0.890173_g18802_i0 PRJNA971676 18891 246 0.890173 2.18982558 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 102 2.7499999999999995e-23   NR XP_001015829.2 312017 g18802 i0 68 1.82926829268293 75 24 91.5 0 22 246 28 102 XP_001015829.2 DUSP domain protein [Tetrahymena thermophila SB210] diamond 450 102 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30095303 30095303 PRJNA971676_P_NODE_14652_length_250_cov_1.491525_g14563_i0 PRJNA971676 14652 250 1.491525 3.7288125 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 105 3.46e-24   NR XP_004030402.1 5932 g14563 i0 58 1.932 81 34 97.2 0 249 7 520 600 XP_004030402.1 hypothetical protein IMG5_161750 [Ichthyophthirius multifiliis] diamond 483 105 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
30468602 30468602 PRJNA971676_P_NODE_11893_length_268_cov_2.082051_g11804_i0 PRJNA971676 11893 268 2.082051 5.57989668 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 122 5.13e-30   NR XP_001014851.2 312017 g11804 i0 96.7 0.682835820895522 61 2 68.3 0 193 11 838 898 XP_001014851.2 GTPase-activator protein for Ras-like GTPase [Tetrahymena thermophila SB210] diamond 183 122 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30727285 30727285 PRJNA971676_P_NODE_19474_length_245_cov_0.895349_g19385_i0 PRJNA971676 19474 245 0.895349 2.19360505 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 117 8.440000000000001e-29   NR KRX08346.1 266149 g19385 i0 60.5 2.97551020408163 81 32 99.2 0 1 243 215 295 KRX08346.1 WD40-repeat-containing domain [Pseudocohnilembus persalinus] diamond 729 117 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31922488 31922488 PRJNA971676_P_NODE_17237_length_248_cov_0.880000_g17148_i0 PRJNA971676 17237 248 0.88 2.1824 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 81.6 3.61e-17   NR CAG9318382.1 1481888 g17148 i0 65.2 0.556451612903226 46 16 55.6 0 247 110 92 137 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 138 81.6 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
32175842 32175842 PRJNA971676_P_NODE_9718_length_289_cov_1.263889_g9629_i0 PRJNA971676 9718 289 1.263889 3.65263921 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 94.4 4.94e-20   NR XP_001017854.2 312017 g9629 i0 83.7 0.508650519031142 49 8 50.9 0 142 288 419 467 XP_001017854.2 C2 domain protein [Tetrahymena thermophila SB210] diamond 147 94.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32207302 32207302 PRJNA971676_P_NODE_16958_length_248_cov_0.880000_g16869_i0 PRJNA971676 16958 248 0.88 2.1824 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 65.5 3.51e-10   NR XP_001009225.2 312017 g16869 i0 47.3 0.895161290322581 74 37 89.5 1 247 26 143 214 XP_001009225.2 WD40 domain protein [Tetrahymena thermophila SB210] diamond 222 65.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32239185 32239185 PRJNA971676_P_NODE_20678_length_244_cov_0.900585_g20589_i0 PRJNA971676 20678 244 0.900585 2.1974274 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 107 4.3799999999999995e-25   NR XP_012651588.1 312017 g20589 i0 87.5 3.44262295081967 56 7 68.9 0 244 77 186 241 XP_012651588.1 ABC-2 family transporter protein [Tetrahymena thermophila SB210] diamond 840 107 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32302542 32302542 PRJNA971676_P_NODE_16139_length_249_cov_0.875000_g16050_i0 PRJNA971676 16139 249 0.875 2.17875 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 123 6.13e-33   NR KAL4478045.1 2486642 g16050 i0 70.5 0.939759036144578 78 23 94 0 1 234 96 173 KAL4478045.1 hypothetical protein ABPG72_013484 [Tetrahymena utriculariae] diamond 234 123 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
32340317 32340317 PRJNA971676_P_NODE_6659_length_334_cov_1.180077_g6570_i0 PRJNA971676 6659 334 1.180077 3.94145718 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 133 5.5e-35   NR XP_001442446.1 5888 g6570 i0 53.2 6.96107784431138 111 52 99.7 0 333 1 233 343 XP_001442446.1 uncharacterized protein GSPATT00001251001 [Paramecium tetraurelia] diamond 2325 134 0.992537313432836 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
32365716 32365716 PRJNA971676_P_NODE_9379_length_293_cov_1.377273_g9290_i0 PRJNA971676 9379 293 1.377273 4.03540989 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 153 9.36e-46   NR OMJ92653.1 5963 g9290 i0 66.7 0.982935153583618 96 32 98.3 0 290 3 15 110 OMJ92653.1 hypothetical protein SteCoe_4526 [Stentor coeruleus] diamond 288 153 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
32530201 32530201 PRJNA971676_P_NODE_13439_length_254_cov_0.850829_g13350_i0 PRJNA971676 13439 254 0.850829 2.16110566 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 119 5.6199999999999995e-32   NR OMJ91892.1 5963 g13350 i0 75.7 31.5708661417323 74 18 87.4 0 225 4 31 104 OMJ91892.1 hypothetical protein SteCoe_5449 [Stentor coeruleus] diamond 8019 119 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;