RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971676" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA971676 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28699941 28699941 PRJNA971676_P_NODE_19307_length_245_cov_0.895349_g19218_i0 PRJNA971676 19307 245 0.895349 2.19360505 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 77 2.71e-14   NR MEA3560387.1 2035772 g19218 i0 88.4 0.52653061224489806 43 5 52.7 0 244 116 362 404 MEA3560387.1 type II secretion system F family protein [Candidatus Omnitrophota bacterium] diamond 129 77 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29394471 29394471 PRJNA971676_P_NODE_17589_length_247_cov_0.885057_g17500_i0 PRJNA971676 17589 247 0.885057 2.18609079 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 130 1.31e-34   NR MEA3328261.1 2035772 g17500 i0 76.8 0.995951417004049 82 19 99.6 0 246 1 76 157 MEA3328261.1 6-phosphofructokinase [Candidatus Omnitrophota bacterium] diamond 246 130 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;