RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA971676", tax_kingdom = "Pseudomonadati" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 4 ✖

tax_kingdom 1

  • Pseudomonadati · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA971676 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26836256 26836256 PRJNA971676_P_NODE_19441_length_245_cov_0.895349_g19352_i0 PRJNA971676 19441 245 0.895349 2.19360505 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 110 5.67e-26   NR MBC8527534.1 2030808 g19352 i0 63.3 0.96734693877551 79 29 96.7 0 8 244 1183 1261 MBC8527534.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Cloacimonadota bacterium] diamond 237 110 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27721435 27721435 PRJNA971676_P_NODE_18184_length_247_cov_0.885057_g18095_i0 PRJNA971676 18184 247 0.885057 2.18609079 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 130 3.47e-36   NR MDK2850133.1 2030808 g18095 i0 75.6 2.98785425101215 82 20 99.6 0 246 1 41 122 MDK2850133.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 738 130 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
29394477 29394477 PRJNA971676_P_NODE_7849_length_314_cov_1.278008_g7760_i0 PRJNA971676 7849 314 1.278008 4.01294512 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 128 9.65e-35   NR HOH46704.1 2030808 g7760 i0 62.1 3.96496815286624 103 39 98.4 0 1 309 4 106 HOH46704.1 NAD(P)H:quinone oxidoreductase [Candidatus Cloacimonadota bacterium] diamond 1245 128 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31701080 31701080 PRJNA971676_P_NODE_16837_length_248_cov_0.880000_g16748_i0 PRJNA971676 16837 248 0.88 2.1824 Candidatus Cloacimonas sp. 4484_2 2053534 Bacteria Bacteria 134 9.89e-37   NR OQX50609.1 1968525 g16748 i0 74 0.931451612903226 77 20 93.1 0 248 18 184 260 OQX50609.1 MAG: hypothetical protein B5M53_12145 [Candidatus Cloacimonas sp. 4484_209] diamond 231 134 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp. 4484_209

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;