RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA971676" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 4 ✖

bioproject 1

  • PRJNA971676 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
944713 944713 PRJNA971676_P_NODE_2461_length_490_cov_0.750600_g2372_i0 PRJNA971676 2461 490 0.7506 3.67794 Cestrum yellow leaf curling virus 175814 Viruses Viruses 256 4.5500000000000006e-79   NR NP_861410.1 175814 g2372 i0 73 0.997959183673469 163 44 99.8 0 1 489 260 422 NP_861410.1 putative multifunctional pol protein [Cestrum yellow leaf curling virus] diamond 489 256 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Soymovirus Soymovirus crispocestri
16568954 16568954 PRJNA971676_P_NODE_2553_length_482_cov_0.784841_g2464_i0 PRJNA971676 2553 482 0.784841 3.78293362 Cestrum yellow leaf curling virus 175814 Viruses Viruses 111 5.49e-25   NR NP_861410.1 175814 g2464 i0 43.2 0.964730290456432 155 76 90.2 4 435 1 29 181 NP_861410.1 putative multifunctional pol protein [Cestrum yellow leaf curling virus] diamond 465 111 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Soymovirus Soymovirus crispocestri
27658029 27658029 PRJNA971676_P_NODE_10304_length_284_cov_1.028436_g10215_i0 PRJNA971676 10304 284 1.028436 2.92075824 Cestrum yellow leaf curling virus 175814 Viruses Viruses 74.7 3.45e-13   NR NP_861410.1 175814 g10215 i0 46.1 0.802816901408451 76 41 80.3 0 230 3 3 78 NP_861410.1 putative multifunctional pol protein [Cestrum yellow leaf curling virus] diamond 228 74.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Soymovirus Soymovirus crispocestri
28510366 28510366 PRJNA971676_P_NODE_6607_length_335_cov_0.965649_g6518_i0 PRJNA971676 6607 335 0.965649 3.23492415 Blueberry red ringspot virus 172220 Viruses Viruses 105 2.13e-24   NR AFE82816.1 172220 g6518 i0 51.6 1.62985074626866 91 44 81.5 0 334 62 188 278 AFE82816.1 movement protein [Blueberry red ringspot virus] diamond 546 105 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Soymovirus Soymovirus maculavaccinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;